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1000G Phase 3 GRCh38 liftover - EUR-nonFIN subset
1000Genomes
updated 17 months ago by 44k • written 3.6 years ago by ▴ 90
0
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0
replies
1.9k
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Comment: Comment: Negative heritability and filtering summary statistics
2.2 years ago by gokberk ▴ 90
0
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1
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1.0k
views
Comment: Comment: How can get significant results from the GWAS summary statistics results
3.0 years ago by gokberk ▴ 90
2
votes
1
reply
1.4k
views
Allele coding in BGENIE GWAS output
gwas bgenie summary statistics
updated 3.0 years ago by ▴ 40 • written 4.3 years ago by ▴ 90
0
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0
replies
1.7k
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Comment: Comment: Miropeats download issue
3.1 years ago by gokberk ▴ 90
0
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1
reply
1.7k
views
Comment: Comment: Miropeats download issue
3.1 years ago by gokberk ▴ 90
0
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1
reply
1.7k
views
Comment: Comment: Miropeats download issue
3.1 years ago by gokberk ▴ 90
3
votes
7
replies
1.7k
views
Miropeats download issue
miropeats
3.1 years ago by gokberk ▴ 90
0
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1
reply
1.7k
views
Comment: Comment: Miropeats download issue
3.1 years ago by gokberk ▴ 90
0
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0
replies
2.1k
views
Comment: Comment: Ensembl phylogenetic context
3.1 years ago by gokberk ▴ 90
0
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1
reply
2.1k
views
Comment: Comment: Ensembl phylogenetic context
3.1 years ago by gokberk ▴ 90
0
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0
replies
2.1k
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Comment: Comment: Ensembl phylogenetic context
3.2 years ago by gokberk ▴ 90
0
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1
reply
2.1k
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Comment: Comment: Ensembl phylogenetic context
3.2 years ago by gokberk ▴ 90
0
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0
replies
2.1k
views
Comment: Comment: Ensembl phylogenetic context
3.2 years ago by gokberk ▴ 90
5
votes
8
replies
2.1k
views
Ensembl phylogenetic context
alignment ensembl phylogeny
3.1 years ago by gokberk ▴ 90
0
votes
0
replies
575
views
Intersecting phyloP bed and per-base bed files
format bedtools bed
3.3 years ago by gokberk ▴ 90
0
votes
0
replies
564
views
"significantly different" heritability
statistics heritability
3.5 years ago by gokberk ▴ 90
0
votes
0
replies
669
views
MAF and LD matching SNP list
variants snpsnap control
3.6 years ago by gokberk ▴ 90
1
vote
1
reply
1.6k
views
Answer: Answer: 1000G Phase 3 GRCh38 liftover - EUR-nonFIN subset
3.6 years ago by gokberk ▴ 90
2
votes
2
replies
1.0k
views
SNP count in a set of genomic regions
annotations SNPs 1000G
updated 3.6 years ago by 14k • written 3.6 years ago by ▴ 90
3
votes
3
replies
1.9k
views
Negative heritability and filtering summary statistics
ldsc partitioned heritability
2.2 years ago by gokberk ▴ 90
2
votes
1
reply
1.9k
views
Answer: Answer: Negative heritability and filtering summary statistics
3.6 years ago by gokberk ▴ 90
0
votes
0
replies
954
views
One-sided test with LDSC --h2 flag and custom annotations
heritability ldsc partitioned
3.6 years ago by gokberk ▴ 90
5
votes
4
replies
8.0k
views
Long-read alignment with Minimap2
minimap2 long-read DNA-seq
updated 4.7 years ago by 20 • written 5.5 years ago by ▴ 90
0
votes
1
reply
853
views
HiSAT2 edit distance option
rna-seq hisat2
updated 4.8 years ago by • 0 • written 5.5 years ago by ▴ 90
5
votes
4
replies
3.8k
views
Extracting uniquely mapped reads from bams
rna-seq hisat2
updated 5.3 years ago by 20 • written 5.5 years ago by ▴ 90
0
votes
0
replies
1.6k
views
Comment: C: Phylogenetic tree construction from small sized SNP data
5.4 years ago by gokberk ▴ 90
2
votes
2
replies
1.6k
views
Phylogenetic tree construction from small sized SNP data
phylogenetic tree SNP SNPhyl
updated 5.4 years ago by 8.8k • written 5.4 years ago by ▴ 90
0
votes
0
replies
1.3k
views
Comment: C: Missing variants in hg38 lift-over of 1000-genomes data
5.4 years ago by gokberk ▴ 90
2
votes
2
replies
1.3k
views
Missing variants in hg38 lift-over of 1000-genomes data
1000genomes vcf
5.4 years ago by gokberk ▴ 90
1
vote
0
replies
1.5k
views
Comment: C: Extracting super-population allele frequencies from 1000 genomes (phase 3) data
5.4 years ago by gokberk ▴ 90
4
votes
2
replies
1.5k
views
Extracting super-population allele frequencies from 1000 genomes (phase 3) data
vcf 1000genomes
5.4 years ago by gokberk ▴ 90
0
votes
1
reply
8.0k
views
Comment: C: Long-read alignment with Minimap2
5.5 years ago by gokberk ▴ 90
2
votes
0
replies
8.0k
views
Answer: A: Long-read alignment with Minimap2
5.5 years ago by gokberk ▴ 90
0
votes
1
reply
3.8k
views
Comment: C: Extracting uniquely mapped reads from bams
5.5 years ago by gokberk ▴ 90
3
votes
1
reply
937
views
Unexpected characters at consensus fasta generated by mpileup
samtools mpileup consensussequence
5.5 years ago by gokberk ▴ 90
0
votes
1
reply
2.5k
views
Comment: C: featureCounts - annotation file issue
5.5 years ago by gokberk ▴ 90
4
votes
3
replies
2.5k
views
featureCounts - annotation file issue
RNA-Seq
5.5 years ago by gokberk ▴ 90
0
votes
0
replies
1.9k
views
Comment: C: Subread alignment issue
5.6 years ago by gokberk ▴ 90
0
votes
4
replies
1.9k
views
Subread alignment issue
rna-seq
5.6 years ago by gokberk ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: Generating count table
5.6 years ago by gokberk ▴ 90
6
votes
2
replies
1.4k
views
Generating count table
RNA-Seq
5.6 years ago by gokberk ▴ 90
2
votes
1
reply
2.4k
views
Annotation problem while using Rsubread
annotation gtf gff
5.6 years ago by gokberk ▴ 90
5
votes
4
replies
1.4k
views
Browsing mappings for multiple BAM files
RNA-Seq
updated 5.6 years ago by ▴ 40 • written 5.6 years ago by ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: Browsing mappings for multiple BAM files
5.6 years ago by gokberk ▴ 90
0
votes
1
reply
2.3k
views
Comment: C: TopHat mapping error
5.6 years ago by gokberk ▴ 90
0
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0
replies
2.3k
views
Comment: C: TopHat mapping error
5.6 years ago by gokberk ▴ 90
0
votes
2
replies
2.3k
views
Comment: C: TopHat mapping error
5.6 years ago by gokberk ▴ 90
0
votes
1
reply
2.3k
views
Comment: C: TopHat mapping error
5.6 years ago by gokberk ▴ 90
0
votes
0
replies
2.3k
views
Comment: C: TopHat mapping error
5.6 years ago by gokberk ▴ 90
56 results • Page 1 of 2
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