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2
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Can´t acces Biomart via R anymore
Biomart
updated 22 months ago by 14k • written 22 months ago by ▴ 80
0
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2
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3.3k
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Comment: A: Mapping sequencing reads to 5-UTR, 3-UTR and CDS using Ensembl GTF files
4.0 years ago by Beginner ▴ 80
7
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7
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3.3k
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Mapping sequencing reads to 5-UTR, 3-UTR and CDS using Ensembl GTF files
RNA-Seq alignment sequencing genome
4.0 years ago by Beginner ▴ 80
0
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0
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3.3k
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Comment: C: Mapping sequencing reads to 5-UTR, 3-UTR and CDS (fasta or gtf?)
4.0 years ago by Beginner ▴ 80
8
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0
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3.5k
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Answer: C: Is it okay to use a ENSEMBL toplevel genome for mapping when no primary assembly
5.2 years ago by Beginner ▴ 80
8
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2
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3.5k
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Is it okay to use a ENSEMBL toplevel genome for mapping when no primary assembly is available?
genome ensembl
5.2 years ago by Beginner ▴ 80
0
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0
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971
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Comment: C: Why and how to discard mapped reads based on strandedness?
5.2 years ago by Beginner ▴ 80
0
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2
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971
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Why and how to discard mapped reads based on strandedness?
RNA-Seq Ribosome Profiling strandedness
updated 5.2 years ago by 14k • written 5.2 years ago by ▴ 80
1
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4
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1.0k
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Probably very simple question for gffread
gffread
updated 5.2 years ago by ★ 1.9k • written 5.2 years ago by ▴ 80
0
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0
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1.0k
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Comment: C: Probably very simple question for gffread
5.2 years ago by Beginner ▴ 80
0
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4
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3.8k
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rRNA and tRNA removal from mouse Ribosome profiling data - getting correct sequences
rRNA tRNA Ribosome profiling Ribo-seq
updated 5 months ago by ▴ 30 • written 5.6 years ago by ▴ 80
0
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0
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3.8k
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Answer: A: rRNA and tRNA removal from mouse Ribosome profiling data - getting correct seque
5.5 years ago by Beginner ▴ 80
0
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1
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3.8k
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Comment: C: rRNA and tRNA removal from mouse Ribosome profiling data - getting correct seque
5.5 years ago by Beginner ▴ 80
0
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0
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7.3k
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Comment: C: How to filter sequencing reads in a fastq file by size?
5.6 years ago by Beginner ▴ 80
0
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1
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7.3k
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Comment: C: How to filter sequencing reads in a fastq file by size?
5.6 years ago by Beginner ▴ 80
3
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6
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7.3k
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How to filter sequencing reads in a fastq file by size?
Ribo-Seq RNA-Seq fastq
updated 20 months ago by 44k • written 5.6 years ago by ▴ 80
0
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0
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7.3k
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Comment: C: How to filter sequencing reads in a fastq file by size?
5.6 years ago by Beginner ▴ 80
1
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2
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1.2k
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Install Perl module without always included "Foo" language (for Biopieces)
Perl Biopieces
updated 5.6 years ago by 44k • written 5.6 years ago by ▴ 80
2
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3
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3.8k
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Can I simply rename a Illumina sequencing file (fastq format) that is named as .txt to .fastq without having any problems?
RNA-Seq sequencing
5.6 years ago by Beginner ▴ 80
0
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0
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3.8k
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Comment: A: Can I simply rename a Illumina sequencing file (fastq format) that is named as .
5.6 years ago by Beginner ▴ 80
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