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750
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Tool to annotate VCF File from bacterial genome SNPs
snp genome sequencing gene
4.0 years ago by Fid_o ▴ 40
0
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0
replies
1.1k
views
Comment: C: SNP Calling using Genome Analysis Toolkit
4.1 years ago by Fid_o ▴ 40
0
votes
5
replies
1.1k
views
SNP Calling using Genome Analysis Toolkit
SNP genome alignment assembly sequencing
4.1 years ago by Fid_o ▴ 40
0
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0
replies
1.1k
views
Comment: C: SNP Calling using Genome Analysis Toolkit
4.1 years ago by Fid_o ▴ 40
6
votes
2
replies
4.5k
views
Visualising Roary Results
sequence roary SNP genome alignment
written 4.7 years ago by ▴ 40
0
votes
2
replies
909
views
Extracting lineages from phylogenetic trees
Phylogenetics Lineage alignment
updated 4.5 years ago by 20 • written 4.6 years ago by ▴ 40
0
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0
replies
3.1k
views
Comment: C: Quality check of sequences in fasta format
4.6 years ago by Fid_o ▴ 40
0
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1
reply
3.1k
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Comment: C: Quality check of sequences in fasta format
4.6 years ago by Fid_o ▴ 40
0
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1
reply
3.1k
views
Comment: C: Quality check of sequences in fasta format
4.6 years ago by Fid_o ▴ 40
0
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1
reply
3.1k
views
Comment: C: Quality check of sequences in fasta format
4.6 years ago by Fid_o ▴ 40
2
votes
8
replies
3.1k
views
Quality check of sequences in fasta format
alignment assembly genome
updated 4.6 years ago by 147k • written 4.6 years ago by ▴ 40
0
votes
2
replies
1.8k
views
Generating Neighbour Joining Tree from Sequences
sequence genome snp
updated 4.7 years ago by ▴ 160 • written 4.7 years ago by ▴ 40
0
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1
reply
595
views
Lineage Separation of Bacterial Sequences
SNP alignment sequence gene
4.7 years ago by Fid_o ▴ 40
2
votes
2
replies
3.1k
views
CONVERT .aln file to .phy for RAxML input
alignment
updated 4.7 years ago by ★ 28k • written 4.7 years ago by ▴ 40
0
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1
reply
2.4k
views
Comment: C: Genome Annotation Output Files Naming
4.7 years ago by Fid_o ▴ 40
3
votes
3
replies
2.4k
views
Genome Annotation Output Files Naming
Annotation genome
updated 4.7 years ago by ★ 28k • written 4.7 years ago by ▴ 40
0
votes
1
reply
920
views
Comment: C: Filtering Whole Genome Sequence Data
4.7 years ago by Fid_o ▴ 40
2
votes
5
replies
920
views
Filtering Whole Genome Sequence Data
sequence genome
4.7 years ago by Fid_o ▴ 40
0
votes
1
reply
780
views
Salmonella Typhimurium Strain Lineage
Salmonella SNP Lineage Linux
4.7 years ago by Fid_o ▴ 40
1
vote
2
replies
2.1k
views
Prokka Python Script for Gene Annotation
Python Prokka Script Annotation Linux
updated 5.0 years ago by ★ 28k • written 5.0 years ago by ▴ 40
0
votes
3
replies
3.7k
views
Comment: C: Python Script to map reads to reference sequence
5.6 years ago by Fid_o ▴ 40
1
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1
reply
3.7k
views
Comment: C: Python Script to map reads to reference sequence
5.6 years ago by Fid_o ▴ 40
0
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1
reply
3.7k
views
Comment: C: Python Script to map reads to reference sequence
5.6 years ago by Fid_o ▴ 40
0
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2
replies
3.7k
views
Comment: C: Python Script to map reads to reference sequence
5.6 years ago by Fid_o ▴ 40
9
votes
13
replies
3.7k
views
Python Script to map reads to reference sequence
sequence python mapping script reference sequence
5.6 years ago by Fid_o ▴ 40
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