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403
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Answer: Answer: Do i need to regressout uninteresting sources of variation bebofe pseudobul DESe
5 days ago by fracarb8 ★ 1.7k
1
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0
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321
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Comment: Comment: Extracting normalized counts from RDS (Seurat) file
11 weeks ago by fracarb8 ★ 1.7k
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0
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1.1k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
3 months ago by fracarb8 ★ 1.7k
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0
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446
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
4 months ago by fracarb8 ★ 1.7k
0
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0
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546
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Comment: Comment: DoubletFinder error
4 months ago by fracarb8 ★ 1.7k
2
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1
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812
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
4 months ago by fracarb8 ★ 1.7k
0
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0
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950
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Comment: Comment: Conversion of Gene Name to Ensembl ID
4 months ago by fracarb8 ★ 1.7k
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0
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369
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
4 months ago by fracarb8 ★ 1.7k
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1
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690
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
6 months ago by fracarb8 ★ 1.7k
1
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0
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1.8k
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
6 months ago by fracarb8 ★ 1.7k
1
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1
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690
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
6 months ago by fracarb8 ★ 1.7k
0
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1
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667
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
6 months ago by fracarb8 ★ 1.7k
0
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1
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723
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
6 months ago by fracarb8 ★ 1.7k
0
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1
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723
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
6 months ago by fracarb8 ★ 1.7k
2
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1
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658
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
7 months ago by fracarb8 ★ 1.7k
0
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1
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512
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Comment: Comment: Addmetadata to seurat obj
7 months ago by fracarb8 ★ 1.7k
2
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0
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535
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Comment: Comment: Ubuntu storage space is decreasing automatically
7 months ago by fracarb8 ★ 1.7k
0
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0
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817
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Comment: Comment: cloupe to 10x format
7 months ago by fracarb8 ★ 1.7k
1
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1
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817
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Answer: Answer: cloupe to 10x format
7 months ago by fracarb8 ★ 1.7k
2
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1
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986
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Answer: Answer: change order of violin plots in ggplot2
updated 8 months ago by 44k • written 8 months ago by ★ 1.7k
1
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1
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2.8k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
8 months ago by fracarb8 ★ 1.7k
0
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0
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748
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Answer: Answer: ArchR Doublet Inference to Signac
8 months ago by fracarb8 ★ 1.7k
2
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1
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521
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
8 months ago by fracarb8 ★ 1.7k
2
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1
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452
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Comment: Comment: compare dimplot(single cell)
8 months ago by fracarb8 ★ 1.7k
3
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0
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415
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Answer: Answer: Doplot to display 2 metadata variables
8 months ago by fracarb8 ★ 1.7k
0
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0
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2.1k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
8 months ago by fracarb8 ★ 1.7k
1
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1
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2.1k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
8 months ago by fracarb8 ★ 1.7k
0
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1
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2.1k
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
8 months ago by fracarb8 ★ 1.7k
0
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0
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893
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Answer: Answer: Error in changing the annotation color of pheatmap
8 months ago by fracarb8 ★ 1.7k
1
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1
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448
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
8 months ago by fracarb8 ★ 1.7k
0
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0
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986
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
8 months ago by fracarb8 ★ 1.7k
1
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0
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690
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
8 months ago by fracarb8 ★ 1.7k
0
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0
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627
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
8 months ago by fracarb8 ★ 1.7k
0
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0
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1.1k
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Answer: Answer: Speed up FindClusters execution?
8 months ago by fracarb8 ★ 1.7k
0
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1
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701
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
9 months ago by fracarb8 ★ 1.7k
1
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1
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5.3k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
9 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
10 months ago by fracarb8 ★ 1.7k
0
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0
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905
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
10 months ago by fracarb8 ★ 1.7k
2
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1
reply
1.6k
views
Comment: Comment: How to remove center population from seurat cluster
11 months ago by fracarb8 ★ 1.7k
2
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2
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1.6k
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Comment: Comment: How to remove center population from seurat cluster
11 months ago by fracarb8 ★ 1.7k
0
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1
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619
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Comment: Comment: convert dataframe R
11 months ago by fracarb8 ★ 1.7k
2
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1
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619
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Answer: Answer: convert dataframe R
11 months ago by fracarb8 ★ 1.7k
3
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0
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4.4k
views
Comment: Comment: Cellcyclescoring did not work in Seurat V5
11 months ago by fracarb8 ★ 1.7k
0
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1
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683
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Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
12 months ago by fracarb8 ★ 1.7k
0
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0
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3.0k
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Answer: Answer: DoubletFinder for Python?
12 months ago by fracarb8 ★ 1.7k
2
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0
replies
1.4k
views
Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
13 months ago by fracarb8 ★ 1.7k
1
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0
replies
563
views
Answer: Answer: seurat-creating heatmaps
13 months ago by fracarb8 ★ 1.7k
0
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1
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2.4k
views
Comment: Comment: Unable to save plots in R using jpeg() or png()
13 months ago by fracarb8 ★ 1.7k
2
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1
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1.7k
views
Answer: Answer: Bioinformatics software for single cell omics
13 months ago by fracarb8 ★ 1.7k
0
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0
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5.3k
views
Comment: Comment: Code for reading h5ad files in R
13 months ago by fracarb8 ★ 1.7k
217 results • Page 1 of 5
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