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Comment: Comment: Assigning cell annotation based on calculated scores.
4 weeks ago by fracarb8 ★ 1.7k
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295
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Comment: Comment: After doublet detection in 10x scRNA-Seq data, there is still evidence of double
5 weeks ago by fracarb8 ★ 1.7k
1
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1
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605
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Answer: Answer: Do i need to regressout uninteresting sources of variation bebofe pseudobul DESe
4 months ago by fracarb8 ★ 1.7k
1
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0
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612
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Comment: Comment: Extracting normalized counts from RDS (Seurat) file
7 months ago by fracarb8 ★ 1.7k
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0
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1.9k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
8 months ago by fracarb8 ★ 1.7k
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0
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794
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
8 months ago by fracarb8 ★ 1.7k
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0
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1.2k
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Comment: Comment: DoubletFinder error
8 months ago by fracarb8 ★ 1.7k
2
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1
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1.7k
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
8 months ago by fracarb8 ★ 1.7k
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0
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1.7k
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Comment: Comment: Conversion of Gene Name to Ensembl ID
8 months ago by fracarb8 ★ 1.7k
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0
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530
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
9 months ago by fracarb8 ★ 1.7k
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1
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1.1k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
10 months ago by fracarb8 ★ 1.7k
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0
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3.0k
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
10 months ago by fracarb8 ★ 1.7k
1
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1
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1.1k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
10 months ago by fracarb8 ★ 1.7k
0
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1
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879
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
10 months ago by fracarb8 ★ 1.7k
0
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1
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1.0k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
10 months ago by fracarb8 ★ 1.7k
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1
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1.0k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
10 months ago by fracarb8 ★ 1.7k
2
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1
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962
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
11 months ago by fracarb8 ★ 1.7k
0
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1
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703
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Comment: Comment: Addmetadata to seurat obj
11 months ago by fracarb8 ★ 1.7k
2
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0
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752
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Comment: Comment: Ubuntu storage space is decreasing automatically
11 months ago by fracarb8 ★ 1.7k
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0
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1.3k
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Comment: Comment: cloupe to 10x format
12 months ago by fracarb8 ★ 1.7k
1
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1
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1.3k
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Answer: Answer: cloupe to 10x format
12 months ago by fracarb8 ★ 1.7k
2
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1
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1.4k
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Answer: Answer: change order of violin plots in ggplot2
updated 12 months ago by 45k • written 12 months ago by ★ 1.7k
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1
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4.3k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
12 months ago by fracarb8 ★ 1.7k
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0
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904
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Answer: Answer: ArchR Doublet Inference to Signac
12 months ago by fracarb8 ★ 1.7k
2
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1
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706
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
12 months ago by fracarb8 ★ 1.7k
2
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1
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586
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Comment: Comment: compare dimplot(single cell)
12 months ago by fracarb8 ★ 1.7k
3
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0
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533
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Answer: Answer: Doplot to display 2 metadata variables
12 months ago by fracarb8 ★ 1.7k
0
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0
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4.0k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
12 months ago by fracarb8 ★ 1.7k
1
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1
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4.0k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
12 months ago by fracarb8 ★ 1.7k
0
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1
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4.0k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
12 months ago by fracarb8 ★ 1.7k
0
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0
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1.3k
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Answer: Answer: Error in changing the annotation color of pheatmap
12 months ago by fracarb8 ★ 1.7k
1
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1
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600
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
13 months ago by fracarb8 ★ 1.7k
0
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0
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1.3k
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
13 months ago by fracarb8 ★ 1.7k
1
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0
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1.0k
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
13 months ago by fracarb8 ★ 1.7k
0
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0
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815
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
13 months ago by fracarb8 ★ 1.7k
0
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0
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1.6k
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Answer: Answer: Speed up FindClusters execution?
13 months ago by fracarb8 ★ 1.7k
0
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1
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949
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
13 months ago by fracarb8 ★ 1.7k
1
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1
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7.8k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
13 months ago by fracarb8 ★ 1.7k
0
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1
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1.6k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
14 months ago by fracarb8 ★ 1.7k
0
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0
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1.1k
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
15 months ago by fracarb8 ★ 1.7k
2
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1
reply
2.3k
views
Comment: Comment: How to remove center population from seurat cluster
15 months ago by fracarb8 ★ 1.7k
2
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2
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2.3k
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Comment: Comment: How to remove center population from seurat cluster
15 months ago by fracarb8 ★ 1.7k
0
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1
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861
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Comment: Comment: convert dataframe R
16 months ago by fracarb8 ★ 1.7k
2
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1
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861
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Answer: Answer: convert dataframe R
16 months ago by fracarb8 ★ 1.7k
3
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0
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5.7k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
16 months ago by fracarb8 ★ 1.7k
0
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1
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873
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Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
16 months ago by fracarb8 ★ 1.7k
0
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0
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3.8k
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Answer: Answer: DoubletFinder for Python?
16 months ago by fracarb8 ★ 1.7k
2
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0
replies
1.9k
views
Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
17 months ago by fracarb8 ★ 1.7k
1
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0
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693
views
Answer: Answer: seurat-creating heatmaps
17 months ago by fracarb8 ★ 1.7k
0
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1
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3.9k
views
Comment: Comment: Unable to save plots in R using jpeg() or png()
17 months ago by fracarb8 ★ 1.7k
219 results • Page 1 of 5
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