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2.4k
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Has the TRON Expression Atlas closed?
RNA-Seq cell-line
updated 7 weeks ago by • 0 • written 6.1 years ago by ★ 1.7k
1
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1
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713
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Comment: Comment: Assigning cell annotation based on calculated scores.
3 months ago by fracarb8 ★ 1.7k
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0
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535
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Comment: Comment: After doublet detection in 10x scRNA-Seq data, there is still evidence of double
3 months ago by fracarb8 ★ 1.7k
1
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1
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716
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Answer: Answer: Do i need to regressout uninteresting sources of variation bebofe pseudobul DESe
7 months ago by fracarb8 ★ 1.7k
1
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0
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845
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Comment: Comment: Extracting normalized counts from RDS (Seurat) file
9 months ago by fracarb8 ★ 1.7k
1
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0
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2.5k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
10 months ago by fracarb8 ★ 1.7k
0
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0
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962
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
11 months ago by fracarb8 ★ 1.7k
0
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0
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1.8k
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Comment: Comment: DoubletFinder error
11 months ago by fracarb8 ★ 1.7k
2
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1
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2.3k
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
11 months ago by fracarb8 ★ 1.7k
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0
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2.1k
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Comment: Comment: Conversion of Gene Name to Ensembl ID
11 months ago by fracarb8 ★ 1.7k
0
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0
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633
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
11 months ago by fracarb8 ★ 1.7k
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1
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1.3k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
12 months ago by fracarb8 ★ 1.7k
1
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0
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3.8k
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
12 months ago by fracarb8 ★ 1.7k
1
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1
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1.3k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
12 months ago by fracarb8 ★ 1.7k
0
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1
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991
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
12 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
13 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
13 months ago by fracarb8 ★ 1.7k
2
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1
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1.2k
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
14 months ago by fracarb8 ★ 1.7k
0
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1
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822
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Comment: Comment: Addmetadata to seurat obj
14 months ago by fracarb8 ★ 1.7k
2
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0
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938
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Comment: Comment: Ubuntu storage space is decreasing automatically
14 months ago by fracarb8 ★ 1.7k
0
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0
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1.6k
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Comment: Comment: cloupe to 10x format
14 months ago by fracarb8 ★ 1.7k
1
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1
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1.6k
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Answer: Answer: cloupe to 10x format
14 months ago by fracarb8 ★ 1.7k
2
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1
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1.6k
views
Answer: Answer: change order of violin plots in ggplot2
updated 15 months ago by 45k • written 15 months ago by ★ 1.7k
1
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1
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5.1k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
15 months ago by fracarb8 ★ 1.7k
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0
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1.0k
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Answer: Answer: ArchR Doublet Inference to Signac
15 months ago by fracarb8 ★ 1.7k
2
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1
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814
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
15 months ago by fracarb8 ★ 1.7k
2
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1
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730
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Comment: Comment: compare dimplot(single cell)
15 months ago by fracarb8 ★ 1.7k
3
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0
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634
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Answer: Answer: Doplot to display 2 metadata variables
15 months ago by fracarb8 ★ 1.7k
0
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0
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4.9k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
15 months ago by fracarb8 ★ 1.7k
1
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1
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4.9k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
15 months ago by fracarb8 ★ 1.7k
0
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1
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4.9k
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
15 months ago by fracarb8 ★ 1.7k
0
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0
replies
1.7k
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Answer: Answer: Error in changing the annotation color of pheatmap
15 months ago by fracarb8 ★ 1.7k
1
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1
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691
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
15 months ago by fracarb8 ★ 1.7k
0
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0
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1.4k
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
15 months ago by fracarb8 ★ 1.7k
1
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0
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1.3k
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
15 months ago by fracarb8 ★ 1.7k
0
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0
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935
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
15 months ago by fracarb8 ★ 1.7k
0
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0
replies
1.9k
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Answer: Answer: Speed up FindClusters execution?
15 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
views
Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
16 months ago by fracarb8 ★ 1.7k
1
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1
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9.7k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
16 months ago by fracarb8 ★ 1.7k
0
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1
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1.9k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
17 months ago by fracarb8 ★ 1.7k
0
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0
replies
1.3k
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
17 months ago by fracarb8 ★ 1.7k
2
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1
reply
2.6k
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Comment: Comment: How to remove center population from seurat cluster
18 months ago by fracarb8 ★ 1.7k
2
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2
replies
2.6k
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Comment: Comment: How to remove center population from seurat cluster
18 months ago by fracarb8 ★ 1.7k
0
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1
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957
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Comment: Comment: convert dataframe R
18 months ago by fracarb8 ★ 1.7k
2
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1
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957
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Answer: Answer: convert dataframe R
18 months ago by fracarb8 ★ 1.7k
3
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0
replies
6.5k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
18 months ago by fracarb8 ★ 1.7k
0
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1
reply
970
views
Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
19 months ago by fracarb8 ★ 1.7k
0
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0
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4.4k
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Answer: Answer: DoubletFinder for Python?
19 months ago by fracarb8 ★ 1.7k
2
votes
0
replies
2.3k
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Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
19 months ago by fracarb8 ★ 1.7k
1
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0
replies
770
views
Answer: Answer: seurat-creating heatmaps
20 months ago by fracarb8 ★ 1.7k
219 results • Page 1 of 5
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