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Answer: Answer: Code for reading h5ad files in R
13 months ago by fracarb8 ★ 1.7k
0
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0
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590
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Comment: Comment: Monocle3 garnett
13 months ago by fracarb8 ★ 1.7k
1
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0
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774
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Answer: Answer: How to get ncol = nrow?
updated 13 months ago by 44k • written 13 months ago by ★ 1.7k
1
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1
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710
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Comment: Comment: How to determine the total count for each gene in lymphotype B
14 months ago by fracarb8 ★ 1.7k
0
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1
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710
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Comment: Comment: How to determine the total count for each gene in lymphotype B
14 months ago by fracarb8 ★ 1.7k
1
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1
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533
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Comment: Comment: Is it normal if regress out the cell cycle effects but the DEGs are quite the si
14 months ago by fracarb8 ★ 1.7k
1
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0
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1.9k
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Answer: Answer: Is there an easy to modify the subplot titles in DimPlot (Seurat)?
updated 14 months ago by 44k • written 14 months ago by ★ 1.7k
2
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0
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1.1k
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Answer: Answer: Add samples IDs to Seurat object when integrating different samples to do differ
updated 14 months ago by 44k • written 14 months ago by ★ 1.7k
1
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1
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803
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Comment: Comment: Dotplot error: subscript out of bound
14 months ago by fracarb8 ★ 1.7k
1
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0
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2.5k
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Answer: Answer: How do I install DSSP?
14 months ago by fracarb8 ★ 1.7k
0
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0
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2.1k
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Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
14 months ago by fracarb8 ★ 1.7k
0
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1
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2.1k
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Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
14 months ago by fracarb8 ★ 1.7k
2
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2
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2.1k
views
Answer: Answer: Selecting MOUSE gene set libraries in Enrichr
14 months ago by fracarb8 ★ 1.7k
1
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1
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875
views
Comment: Comment: Converting scMultiome data to loom using SEURAT
14 months ago by fracarb8 ★ 1.7k
1
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0
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994
views
Answer: Answer: UMAP graph using DimPlot pre/post integration
14 months ago by fracarb8 ★ 1.7k
1
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1
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1.1k
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Comment: Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
15 months ago by fracarb8 ★ 1.7k
0
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0
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2.3k
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Comment: Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
15 months ago by fracarb8 ★ 1.7k
0
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1
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2.3k
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Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
15 months ago by fracarb8 ★ 1.7k
0
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0
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4.8k
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Answer: Answer: InferCNV results interpretation
15 months ago by fracarb8 ★ 1.7k
1
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0
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1.3k
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Answer: Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
15 months ago by fracarb8 ★ 1.7k
1
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0
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2.4k
views
Answer: Answer: Change transparency/alpha in seurat's vlnPlot()
15 months ago by fracarb8 ★ 1.7k
1
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0
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715
views
Answer: Answer: HeatMap, R, Rownames
16 months ago by fracarb8 ★ 1.7k
0
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1
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1.1k
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Answer: Answer: How to obtain cell-cell interaction list
16 months ago by fracarb8 ★ 1.7k
0
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0
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1.4k
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Comment: Comment: Housekeeping genes scRNA seq
16 months ago by fracarb8 ★ 1.7k
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2
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2.1k
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Comment: Comment: scrna seq analysis - doublets
16 months ago by fracarb8 ★ 1.7k
5
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1
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3.7k
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Answer: Answer: In Scanpy, how to RDS file and merge it with other Scanpy objects.
17 months ago by fracarb8 ★ 1.7k
7
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0
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8.7k
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Answer: Answer: Convert Human to Mouse Symbols
17 months ago by fracarb8 ★ 1.7k
0
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0
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970
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Answer: Answer: Uploading 10x Data into R for Monocle 3
17 months ago by fracarb8 ★ 1.7k
0
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0
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840
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Answer: Answer: What kind of statistical test does Cellranger count use?
17 months ago by fracarb8 ★ 1.7k
0
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0
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1.1k
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Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
18 months ago by fracarb8 ★ 1.7k
2
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0
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5.8k
views
Answer: Answer: Seurat 'DoHeatmap()' hierarchical clustering
18 months ago by fracarb8 ★ 1.7k
0
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0
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1.2k
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Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
18 months ago by fracarb8 ★ 1.7k
0
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0
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700
views
Comment: Comment: Remove string from Seurat Object
19 months ago by fracarb8 ★ 1.7k
0
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0
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29k
views
Comment: Comment: How to get subset of a Seurat object based on metadata?
20 months ago by fracarb8 ★ 1.7k
0
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1
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29k
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Answer: Answer: How to get subset of a Seurat object based on metadata?
20 months ago by fracarb8 ★ 1.7k
1
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0
replies
1.4k
views
Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
20 months ago by fracarb8 ★ 1.7k
0
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1
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1.4k
views
Answer: Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
20 months ago by fracarb8 ★ 1.7k
0
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1
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3.1k
views
Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
21 months ago by fracarb8 ★ 1.7k
0
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1
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3.1k
views
Answer: Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
21 months ago by fracarb8 ★ 1.7k
0
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1
reply
1.3k
views
Comment: Comment: How to use ClusterProfiler
21 months ago by fracarb8 ★ 1.7k
1
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0
replies
477
views
Comment: Comment: Font name used in dittoSeq?
21 months ago by fracarb8 ★ 1.7k
2
votes
1
reply
744
views
Comment: Comment: R bug during normalize
21 months ago by fracarb8 ★ 1.7k
0
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1
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780
views
Answer: Answer: exchange the monocle data with Seurat
21 months ago by fracarb8 ★ 1.7k
1
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0
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909
views
Comment: Comment: HLA typing with archasHLA - DNA seq?
22 months ago by fracarb8 ★ 1.7k
1
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0
replies
1.0k
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
23 months ago by fracarb8 ★ 1.7k
2
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1
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1.0k
views
Answer: Answer: bash script error to copy files from multiple directories to one directory
23 months ago by fracarb8 ★ 1.7k
1
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0
replies
687
views
Answer: Answer: Extract Monocle2 "State" for Seurat
2.0 years ago by fracarb8 ★ 1.7k
0
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0
replies
1.5k
views
Comment: Comment: How can I convert -log10 (p-value) to p-value?
2.0 years ago by fracarb8 ★ 1.7k
0
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0
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979
views
Comment: Comment: How to deal with "///" in between gene symbols?
2.0 years ago by fracarb8 ★ 1.7k
0
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1
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2.1k
views
Comment: Comment: Tuning seurat integration strength to prevent overcorrection
2.2 years ago by fracarb8 ★ 1.7k
217 results • Page 2 of 5
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