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0
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0
replies
732
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SVA variable of interest in eQTL analysis
sva
eqtl
3.6 years ago by
Colari19
▴ 90
0
votes
1
reply
623
views
Non-european ancestry in eQTL analysis
gwas
eqtl
updated 3.6 years ago by
sim.j.baum
▴ 160 • written 3.6 years ago by
Colari19
▴ 90
0
votes
0
replies
8.4k
views
Comment:
C: What is a suitable LD threshold for LD pruning of snp data?
4.3 years ago by
Colari19
▴ 90
16
votes
2
replies
8.4k
views
What is a suitable LD threshold for LD pruning of snp data?
SNP
eqtl
LD
updated 4.3 years ago by
reza.jabal
▴ 580 • written 4.3 years ago by
Colari19
▴ 90
5
votes
1
reply
2.7k
views
How to normalise RNA-Seq counts for eQTL analysis with MT-eQTL
RNA-Seq
eQTL
MatrixeQTL
updated 4.4 years ago by
GouthamAtla
12k • written 4.4 years ago by
Colari19
▴ 90
0
votes
1
reply
2.7k
views
Comment:
C: Covariates for eQTL analysis
4.4 years ago by
Colari19
▴ 90
6
votes
4
replies
2.7k
views
Covariates for eQTL analysis
eQTL
MatrixeQTL
updated 3.0 years ago by
IZT
• 0 • written 4.4 years ago by
Colari19
▴ 90
0
votes
0
replies
908
views
Is it possible to run Matrix eQTL with multiple samples per patient?
eQTL
R
RNA-Seq
4.8 years ago by
Colari19
▴ 90
5
votes
4
replies
2.8k
views
How to compare two sets of results from Limma?
RNA-Seq
limma
R
voom
updated 4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k • written 4.9 years ago by
Colari19
▴ 90
0
votes
0
replies
1.0k
views
Comment:
C: Visualisation of SNPs in R
5.0 years ago by
Colari19
▴ 90
5
votes
2
replies
1.0k
views
Visualisation of SNPs in R
SNP
R
gene
5.0 years ago by
Colari19
▴ 90
0
votes
0
replies
2.2k
views
Comment:
C: Functional analysis of RNASeq differentially expressed genes
5.0 years ago by
Colari19
▴ 90
8
votes
2
replies
2.2k
views
Functional analysis of RNASeq differentially expressed genes
RNA-Seq
Limma
CAMERA
IPA
GSEA
updated 5.0 years ago by
h.mon
35k • written 5.0 years ago by
Colari19
▴ 90
0
votes
0
replies
1.2k
views
Comment:
C: Voom with QuSAGE
5.1 years ago by
Colari19
▴ 90
3
votes
2
replies
1.2k
views
Voom with QuSAGE
RNA-Seq
QuSAGE
Limma
Voom
R
updated 5.1 years ago by
Gordon Smyth
★ 7.6k • written 5.1 years ago by
Colari19
▴ 90
2
votes
1
reply
2.8k
views
How to merge Kallisto TSV files for use with Tximport
RNA-Seq
R
Kallisto
Tximport
5.5 years ago by
Colari19
▴ 90
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