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samtools mpileup quality filtering for long read ONT data
samtools long reads ont
updated 3.5 years ago by ★ 1.0k • written 4.6 years ago by ▴ 40
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Answer: A: coverage differences between samtools depth and samtools mpileup
4.6 years ago by regue.hadrien ▴ 40
0
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2
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1.4k
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coverage differences between samtools depth and samtools mpileup
samtools ONT long read
4.6 years ago by regue.hadrien ▴ 40
2
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0
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1.1k
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Answer: A: snakemake : associating 2 wildcards for a specific mapping
4.9 years ago by regue.hadrien ▴ 40
2
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1
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1.1k
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snakemake : associating 2 wildcards for a specific mapping
snakemake wildcards
4.9 years ago by regue.hadrien ▴ 40
0
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0
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7.2k
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Answer: A: Launch a snakefile involving multiple conda environment using an snakemake speci
5.0 years ago by regue.hadrien ▴ 40
1
vote
8
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7.2k
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Launch a snakefile involving multiple conda environment using an snakemake specific environment
snakemake conda environment
5.0 years ago by regue.hadrien ▴ 40
0
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0
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7.2k
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Comment: C: Launch a snakefile involving multiple conda environment using an snakemake speci
5.0 years ago by regue.hadrien ▴ 40
0
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1
reply
7.2k
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Comment: C: Launch a snakefile involving multiple conda environment using an snakemake speci
5.0 years ago by regue.hadrien ▴ 40
0
votes
1
reply
7.2k
views
Comment: C: Launch a snakefile involving multiple conda environment using an snakemake speci
5.0 years ago by regue.hadrien ▴ 40
0
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0
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3.3k
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Comment: C: R : Plotting several variables using ggplot geombar
5.0 years ago by regue.hadrien ▴ 40
0
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2
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3.3k
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Comment: C: R : Plotting several variables using ggplot geombar
5.0 years ago by regue.hadrien ▴ 40
0
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0
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3.3k
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Comment: C: R : Plotting several variables using ggplot geombar
5.0 years ago by regue.hadrien ▴ 40
3
votes
7
replies
3.3k
views
R : Plotting several variables using ggplot geombar
R ggplot2
updated 5.0 years ago by ▴ 40 • written 5.0 years ago by ▴ 40
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0
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1.1k
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Comment: C: compute genome coverage from specific bam contig
5.0 years ago by regue.hadrien ▴ 40
1
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2
replies
1.1k
views
compute genome coverage from specific bam contig
samtools bedtools
5.0 years ago by regue.hadrien ▴ 40
0
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1
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1.9k
views
Comment: A: Snakemake and BBsplit.sh for filtrate human reads : memory management
5.3 years ago by regue.hadrien ▴ 40
9
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5
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1.9k
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Snakemake and BBsplit.sh for filtrate human reads : memory management
snakemake BBmap
5.3 years ago by regue.hadrien ▴ 40
0
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0
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1.8k
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Comment: C: Snakemake - generate an unkown file in input
5.4 years ago by regue.hadrien ▴ 40
0
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1
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1.8k
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Comment: C: Snakemake - generate an unkown file in input
5.4 years ago by regue.hadrien ▴ 40
0
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1
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1.8k
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Comment: C: Snakemake - generate an unkown file in input
5.4 years ago by regue.hadrien ▴ 40
4
votes
7
replies
1.8k
views
Snakemake - generate an unkown file in input
snakemake R
updated 5.4 years ago by 5.8k • written 5.4 years ago by ▴ 40
1
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1
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5.8k
views
Comment: C: snakemake rule input from multiple directories and proceed them separatly
5.4 years ago by regue.hadrien ▴ 40
0
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1
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5.8k
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Comment: C: snakemake rule input from multiple directories and proceed them separatly
5.4 years ago by regue.hadrien ▴ 40
0
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1
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5.8k
views
Comment: C: snakemake rule input from multiple directories and proceed them separatly
5.4 years ago by regue.hadrien ▴ 40
7
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10
replies
5.8k
views
snakemake rule input from multiple directories and proceed them separatly
snakemake MinION
updated 5.4 years ago by 105k • written 5.4 years ago by ▴ 40
0
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0
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5.8k
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Comment: C: snakemake rule input from multiple directories and proceed them separatly
5.4 years ago by regue.hadrien ▴ 40
0
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1
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2.5k
views
Comment: C: Rscript use with snakemake - The rule is not executed
5.4 years ago by regue.hadrien ▴ 40
5
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5
replies
2.5k
views
Rscript use with snakemake - The rule is not executed
R snakemake
updated 5.4 years ago by 105k • written 5.4 years ago by ▴ 40
0
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1
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2.5k
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Comment: C: Rscript use with snakemake - The rule is ot executed
updated 5.4 years ago by 105k • written 5.4 years ago by ▴ 40
0
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0
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3.9k
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Comment: C: Design Formula With DESeq2
6.0 years ago by regue.hadrien ▴ 40
0
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1
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3.9k
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Comment: C: Design Formula With DESeq2
6.0 years ago by regue.hadrien ▴ 40
1
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1
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3.9k
views
Comment: A: Design Formula With DESeq2
6.0 years ago by regue.hadrien ▴ 40
8
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11
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3.9k
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Design Formula With DESeq2
RNA-Seq
6.0 years ago by regue.hadrien ▴ 40
0
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0
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3.9k
views
Comment: C: Design Formula With DESeq2
6.0 years ago by regue.hadrien ▴ 40
0
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0
replies
3.9k
views
Comment: C: Design Formula With DESeq2
6.0 years ago by regue.hadrien ▴ 40
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