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509
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Comment: Comment: Trimmomatic running but files containing purged reads are empty
6 months ago by Wilber0x ▴ 50
1
vote
3
replies
509
views
Trimmomatic running but files containing purged reads are empty
fastqc fastq trimmomatic
updated 6 months ago by 147k • written 6 months ago by ▴ 50
0
votes
0
replies
291
views
Removal of inverted repeat copy from chloroplast genome
sequence
2.7 years ago by Wilber0x ▴ 50
0
votes
1
reply
826
views
blastn cut off values
blast
updated 3.5 years ago by ▴ 160 • written 3.5 years ago by ▴ 50
0
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1
reply
1.5k
views
Comment: Comment: Joining blast hits together into single fasta sequence
3.6 years ago by Wilber0x ▴ 50
0
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2
replies
1.5k
views
Comment: Comment: Joining blast hits together into single fasta sequence
3.6 years ago by Wilber0x ▴ 50
6
votes
8
replies
1.5k
views
Joining blast hits together into single fasta sequence
sequence genomics blast
updated 3.6 years ago by 21k • written 3.6 years ago by ▴ 50
0
votes
1
reply
545
views
genomes from genbank showing extra annotations in benchling
genome sequence genbank
3.7 years ago by Wilber0x ▴ 50
0
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1
reply
1.2k
views
Comment: C: Downloading specific gene sequences within a genome from genbank using biopython
3.8 years ago by Wilber0x ▴ 50
2
votes
4
replies
1.2k
views
Downloading specific gene sequences within a genome from genbank using biopython
gene sequence python
3.8 years ago by Wilber0x ▴ 50
0
votes
0
replies
868
views
Comment: C: Compare Differences in a sequence between a SAM file and a FASTA file
3.8 years ago by Wilber0x ▴ 50
5
votes
4
replies
1.4k
views
Running blast shell script within python pipeline
sequence blast biopython
updated 3.8 years ago by 21k • written 3.8 years ago by ▴ 50
0
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1
reply
1.4k
views
Comment: C: Running blast shell script within python pipeline
3.8 years ago by Wilber0x ▴ 50
0
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0
replies
478
views
Methods for quantifying state change in phylogeny- consistency index
sequence phylogenetics
3.9 years ago by Wilber0x ▴ 50
0
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0
replies
1.1k
views
Comment: C: Biopython - AttributeError: when downloading from genbank
4.1 years ago by Wilber0x ▴ 50
0
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0
replies
1.1k
views
Comment: C: Biopython - AttributeError: when downloading from genbank
4.1 years ago by Wilber0x ▴ 50
0
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1
reply
1.1k
views
Comment: C: Biopython - AttributeError: when downloading from genbank
4.1 years ago by Wilber0x ▴ 50
6
votes
10
replies
1.1k
views
Biopython - AttributeError: when downloading from genbank
biopython software error
updated 4.1 years ago by ★ 1.5k • written 4.1 years ago by ▴ 50
0
votes
1
reply
1.1k
views
Comment: C: Biopython - AttributeError: when downloading from genbank
4.1 years ago by Wilber0x ▴ 50
0
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0
replies
1.1k
views
Comment: C: Biopython - AttributeError: when downloading from genbank
4.1 years ago by Wilber0x ▴ 50
0
votes
0
replies
760
views
Use mesquite to make a supertree
phylogeny phylogenetics genome alignment sequence
4.2 years ago by Wilber0x ▴ 50
0
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0
replies
1.1k
views
Comment: C: Software to allow manual adding of branches to to phylogenetic tree
4.2 years ago by Wilber0x ▴ 50
0
votes
2
replies
1.1k
views
Software to allow manual adding of branches to to phylogenetic tree
genome phylogenetics phylogeny evolution
updated 4.2 years ago by ★ 28k • written 4.3 years ago by ▴ 50
3
votes
1
reply
2.8k
views
RAxML generate best tree from 500 bootstrap trees
sequence phylogenetics raxml
updated 4.4 years ago by ▴ 240 • written 4.4 years ago by ▴ 50
0
votes
0
replies
1.1k
views
truncate VCF files so they are same length
vcf SNP sequence genome
updated 5.0 years ago by 20 • written 5.1 years ago by ▴ 50
11
votes
3
replies
8.6k
views
alignment of multiple multifasta files- MAFFT command line
mafft alignment sequence
updated 5.0 years ago by 35k • written 5.0 years ago by ▴ 50
3
votes
3
replies
4.0k
views
HMMER installed with conda: no tutorial folder
HMMER genome alignment installation
updated 5.0 years ago by ▴ 60 • written 5.0 years ago by ▴ 50
0
votes
5
replies
3.4k
views
finding specific SNPs in VCF files
snp alignment gene next-gen genome
updated 5.3 years ago by ★ 3.8k • written 5.3 years ago by ▴ 50
0
votes
1
reply
3.4k
views
Comment: C: finding specific SNPs in VCF files
5.3 years ago by Wilber0x ▴ 50
0
votes
2
replies
1.6k
views
Decrease stringency of bowtie2
next-gen assembly sequence alignment
updated 5.3 years ago by 35k • written 5.3 years ago by ▴ 50
2
votes
2
replies
2.6k
views
Identifying unique SNPs between species
snp vcf alignment
updated 5.4 years ago by 16k • written 5.4 years ago by ▴ 50
31 results • Page 1 of 1
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