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2
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426
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Answer: Answer: b37 liftover
29 days ago by Giulio Genovese ▴ 600
1
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359
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Answer: Answer: Picard LiftoverVCF Maps Variants to Incorrect Chromosomes When Processing Indivi
3 months ago by Giulio Genovese ▴ 600
2
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1
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509
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Answer: Answer: IDAT to FASTA workflow
3 months ago by Giulio Genovese ▴ 600
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2.1k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
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1
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2.1k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
0
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1
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2.1k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
1
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1
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2.1k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
0
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0
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2.1k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
3
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2
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2.1k
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Answer: Answer: Current best practive to liftOver many SNVs from hg19 to GRCh38
5 months ago by Giulio Genovese ▴ 600
1
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1
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968
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Answer: Answer: More than 90% of variants were failed to match, using LiftoverVcf of Picard.
7 months ago by Giulio Genovese ▴ 600
0
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1
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968
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Comment: Comment: More than 90% of variants were failed to match, using LiftoverVcf of Picard.
7 months ago by Giulio Genovese ▴ 600
1
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0
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1.3k
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Comment: Comment: Why is UCSC lift over failing to convert a specific position?
8 months ago by Giulio Genovese ▴ 600
5
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1.3k
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Answer: Answer: Why is UCSC lift over failing to convert a specific position?
8 months ago by Giulio Genovese ▴ 600
2
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0
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749
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Comment: Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK
9 months ago by Giulio Genovese ▴ 600
0
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2
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763
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Answer: Answer: Can Metal merge two GWAS Summary data even if the versions of SNP id are differe
11 months ago by Giulio Genovese ▴ 600
0
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0
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941
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Comment: Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 months ago by Giulio Genovese ▴ 600
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0
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941
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Comment: Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 months ago by Giulio Genovese ▴ 600
0
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1
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941
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Comment: Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 months ago by Giulio Genovese ▴ 600
0
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1
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941
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Comment: Comment: 1000 Genome: Cause of duplicate variants with different genotypes
12 months ago by Giulio Genovese ▴ 600
0
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0
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854
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Answer: Answer: How to find SNP locations in assemblies other than hg38
12 months ago by Giulio Genovese ▴ 600
0
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0
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1.1k
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Comment: Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
12 months ago by Giulio Genovese ▴ 600
0
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0
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1.4k
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Comment: Comment: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
13 months ago by Giulio Genovese ▴ 600
0
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1
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1.4k
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Comment: Comment: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
13 months ago by Giulio Genovese ▴ 600
2
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1
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1.4k
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Answer: Answer: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
13 months ago by Giulio Genovese ▴ 600
0
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1
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1.1k
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Comment: Comment: Picard Liftover MismatchedRefAllele PsychArray
16 months ago by Giulio Genovese ▴ 600
1
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0
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2.3k
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Comment: Comment: How to choose LiftOver chain file
16 months ago by Giulio Genovese ▴ 600
0
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0
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2.1k
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Comment: Comment: Idat raw data conversion
17 months ago by Giulio Genovese ▴ 600
2
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1
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2.1k
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Comment: Comment: Idat raw data conversion
17 months ago by Giulio Genovese ▴ 600
5
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1
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2.3k
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Answer: Answer: Liftover GRCh37 to hg38 1kg/GATK.
17 months ago by Giulio Genovese ▴ 600
0
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0
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1.4k
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Answer: Answer: how to change the 'bcftools plugin' temp directory
18 months ago by Giulio Genovese ▴ 600
1
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0
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936
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Answer: Answer: Liftedover vcf header/contig compatibility
18 months ago by Giulio Genovese ▴ 600
2
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0
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3.9k
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Answer: Answer: Using LiftOver to change genomic build
24 months ago by Giulio Genovese ▴ 600
0
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0
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3.4k
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Comment: Comment: Can't liftover vcf file from hg19 to hg38
2.0 years ago by Giulio Genovese ▴ 600
2
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0
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1.3k
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Answer: Answer: Axiom PMRA cel files to VCF format
2.0 years ago by Giulio Genovese ▴ 600
1
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0
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3.4k
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Comment: Comment: Can't liftover vcf file from hg19 to hg38
2.0 years ago by Giulio Genovese ▴ 600
1
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2
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3.4k
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Comment: Comment: Can't liftover vcf file from hg19 to hg38
2.0 years ago by Giulio Genovese ▴ 600
1
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1
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3.4k
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Comment: Comment: Can't liftover vcf file from hg19 to hg38
2.0 years ago by Giulio Genovese ▴ 600
5
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2
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3.4k
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Answer: Answer: Can't liftover vcf file from hg19 to hg38
2.0 years ago by Giulio Genovese ▴ 600
0
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0
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2.3k
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Comment: Comment: High ref mismatch rate after liftOver from 23andme hg19 to hg38
2.1 years ago by Giulio Genovese ▴ 600
1
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1
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2.3k
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Answer: Answer: High ref mismatch rate after liftOver from 23andme hg19 to hg38
2.1 years ago by Giulio Genovese ▴ 600
0
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0
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3.0k
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Answer: Answer: gatk LiftoverVCF finishes with no output VCF nor error.
2.1 years ago by Giulio Genovese ▴ 600
0
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0
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1.7k
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Answer: Answer: Looking for LDL GWAS summary stats in hg38
2.1 years ago by Giulio Genovese ▴ 600
2
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0
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3.7k
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Comment: Comment: Picard LiftOver rejecting all Variants
2.1 years ago by Giulio Genovese ▴ 600
4
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1
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3.7k
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Answer: Answer: Picard LiftOver rejecting all Variants
2.1 years ago by Giulio Genovese ▴ 600
0
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0
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4.2k
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Comment: Comment: How can I create an Illumina report in Linux using IDAT files?
3.8 years ago by Giulio Genovese ▴ 600
0
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0
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4.2k
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Comment: Comment: How can I create an Illumina report in Linux using IDAT files?
3.8 years ago by Giulio Genovese ▴ 600
0
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0
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2.7k
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Comment: C: What reference build are affymetrix 5.0 arrays?
5.1 years ago by Giulio Genovese ▴ 600
0
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1
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2.7k
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Comment: C: What reference build are affymetrix 5.0 arrays?
5.1 years ago by Giulio Genovese ▴ 600
0
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1
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2.7k
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Answer: A: What reference build are affymetrix 5.0 arrays?
5.1 years ago by Giulio Genovese ▴ 600
0
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0
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2.5k
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Answer: A: SNP array CNV calling for Cancer tissue (.CEL files)
5.1 years ago by Giulio Genovese ▴ 600
70 results • Page 1 of 2
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