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0
replies
302
views
How to identify the phylogenetic node age of RNAs?
phylogeny
genome
evolution
RNA-seq
9 months ago by
Apex92
▴ 320
0
votes
1
reply
315
views
How to perform enrichment p-value for a motif
Enrichment
statistics
updated 9 months ago by
Trivas
★ 1.8k • written 9 months ago by
Apex92
▴ 320
0
votes
0
replies
280
views
How to calculate the percentage of hydrophobic amino acids?
genome
RNA-Seq
Splicing
sequencing
10 months ago by
Apex92
▴ 320
0
votes
0
replies
19k
views
Comment:
Comment: Converting gtf format to bed format
12 months ago by
Apex92
▴ 320
0
votes
12
replies
3.3k
views
Differential gene expression analysis with no replicates using edgeR
edgeR
RNA-seq
DEG
updated 12 months ago by
Sajad
▴ 90 • written 2.1 years ago by
Apex92
▴ 320
0
votes
1
reply
710
views
How to interpret the negative Log2FC from DESeq2 output?
DESeq2
statistics
gene-expression
DEG
updated 14 months ago by
Ram
44k • written 14 months ago by
Apex92
▴ 320
0
votes
0
replies
627
views
Comment:
Comment: How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
15 months ago by
Apex92
▴ 320
0
votes
0
replies
5.3k
views
Comment:
Comment: Problem in indexing toplevel genome with HISAT2
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
0
replies
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
1
reply
2.4k
views
Comment:
Comment: bcl2fastq conversion with specifying exact match of indices
16 months ago by
Apex92
▴ 320
0
votes
18
replies
2.4k
views
bcl2fastq conversion with specifying exact match of indices
genome
RNA-Seq
sequencing
updated 16 months ago by
GenoMax
148k • written 16 months ago by
Apex92
▴ 320
0
votes
0
replies
554
views
Comment:
Comment: Is chi-square test suitable for my categorical data?
16 months ago by
Apex92
▴ 320
0
votes
2
replies
554
views
Is chi-square test suitable for my categorical data?
statistics
r
16 months ago by
Apex92
▴ 320
0
votes
0
replies
660
views
Comment:
Comment: Testing Gene Set Overlap with Binomial Distribution
16 months ago by
Apex92
▴ 320
0
votes
2
replies
660
views
Testing Gene Set Overlap with Binomial Distribution or Hypergeometric Distribution
statistics
Enrichment
16 months ago by
Apex92
▴ 320
0
votes
1
reply
627
views
How to run quantifier from miRDeep2 (miRNA seqs from MirGeneDB)
quantifier
alignment
mapping
mirdeep2
15 months ago by
Apex92
▴ 320
0
votes
0
replies
496
views
Finding ORF via UCSC genome browser
genome
RNA-Seq
sequencing
18 months ago by
Apex92
▴ 320
0
votes
1
reply
1.0k
views
Comment:
Comment: gene enrichmnet analysis
18 months ago by
Apex92
▴ 320
0
votes
1
reply
1.0k
views
Answer:
Answer: gene enrichmnet analysis
18 months ago by
Apex92
▴ 320
0
votes
0
replies
770
views
Comment:
Comment: Confirming intron length
18 months ago by
Apex92
▴ 320
0
votes
2
replies
770
views
Confirming intron length
genome
RNA-Seq
sequencing
18 months ago by
Apex92
▴ 320
0
votes
0
replies
628
views
How the "IJC" is calculated in rMATS tool?
Sashimi
sequencing
alignment
rMATS
rna-seq
19 months ago by
Apex92
▴ 320
1
vote
2
replies
819
views
How to split a fastq file to multiples fastq files
fastq
sequencing
rna-seq
20 months ago by
Apex92
▴ 320
1
vote
0
replies
819
views
Answer:
Answer: How to split a fastq file to multiples fastq files
20 months ago by
Apex92
▴ 320
0
votes
0
replies
1.5k
views
Comment:
Comment: How to demultiplex single end - dual index run - NextSeq 500
21 months ago by
Apex92
▴ 320
0
votes
1
reply
1.5k
views
Comment:
Comment: How to demultiplex single end - dual index run - NextSeq 500
21 months ago by
Apex92
▴ 320
0
votes
0
replies
1.5k
views
Comment:
Comment: How to demultiplex single end - dual index run - NextSeq 500
21 months ago by
Apex92
▴ 320
0
votes
1
reply
1.5k
views
Comment:
Comment: How to demultiplex single end - dual index run - NextSeq 500
21 months ago by
Apex92
▴ 320
4
votes
7
replies
1.5k
views
How to demultiplex single-end dual indexed run - NextSeq 500
sequencing
bcl2fastq
rna-seq
21 months ago by
Apex92
▴ 320
0
votes
5
replies
1.3k
views
How to get human cDNA sequences together with UTR regions?
transcripts
cDNA
genome
rna-seq
updated 21 months ago by
Istvan Albert
102k • written 21 months ago by
Apex92
▴ 320
0
votes
1
reply
1.3k
views
Answer:
Answer: How to get human cDNA sequences together with UTR regions?
21 months ago by
Apex92
▴ 320
2
votes
2
replies
799
views
How to compare different illumina indices with each other to see how similar or different they are
alignment
sequencing
rna-seq
updated 22 months ago by
GenoMax
148k • written 22 months ago by
Apex92
▴ 320
1
vote
0
replies
1.5k
views
Comment:
Comment: Annotating ENS codes to gene name
22 months ago by
Apex92
▴ 320
1
vote
1
reply
1.5k
views
Answer:
Answer: Annotating ENS codes to gene name
22 months ago by
Apex92
▴ 320
0
votes
0
replies
779
views
Answer:
Answer: transcriptomincs
23 months ago by
Apex92
▴ 320
1
vote
0
replies
711
views
Comment:
Comment: Gene id to Uniprot id
23 months ago by
Apex92
▴ 320
0
votes
1
reply
1.4k
views
Comment:
Comment: Bowtie error when indexing a reference file
23 months ago by
Apex92
▴ 320
0
votes
1
reply
1.4k
views
Comment:
Comment: Bowtie error when indexing a reference file
23 months ago by
Apex92
▴ 320
1
vote
6
replies
1.4k
views
Bowtie error when indexing a reference file
bowtie
RNA-seq
updated 23 months ago by
ATpoint
86k • written 23 months ago by
Apex92
▴ 320
0
votes
2
replies
3.3k
views
Comment:
Comment: Differential gene expression analysis with no replicates using edgeR
2.1 years ago by
Apex92
▴ 320
0
votes
0
replies
2.3k
views
Comment:
Comment: How to download the entire Run from Basespace illumina
2.1 years ago by
Apex92
▴ 320
6
votes
2
replies
2.3k
views
How to download the entire Run from Illumina BaseSpace
illumina
sequencing
RNA-seq
2.1 years ago by
Apex92
▴ 320
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