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404
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miRNA analysis
miRNA
vescicles
extracellular
6 months ago by
deniselavezzari
• 0
0
votes
1
reply
1.2k
views
Comment:
Comment: Python table data extraction
updated 2.2 years ago by
Ram
45k • written 2.8 years ago by
deniselavezzari
• 0
0
votes
5
replies
1.2k
views
Python table data extraction
python
updated 2.2 years ago by
Ram
45k • written 2.8 years ago by
deniselavezzari
• 0
3
votes
2
replies
772
views
Assembly or alignment?
sequencing
reads
assembly
alignment
updated 2.9 years ago by
colindaven
7.6k • written 2.9 years ago by
deniselavezzari
• 0
0
votes
0
replies
753
views
Comment:
Comment: SV on single-end data
3.1 years ago by
deniselavezzari
• 0
1
vote
2
replies
753
views
SV on single-end data
sequencing
variant
calling
3.1 years ago by
deniselavezzari
• 0
2
votes
3
replies
1.0k
views
How to interpret flagstat output
sequencing
reads
updated 3.1 years ago by
Istvan Albert
102k • written 3.1 years ago by
deniselavezzari
• 0
0
votes
1
reply
1.0k
views
Comment:
Comment: How to interpret flagstat output
3.1 years ago by
deniselavezzari
• 0
0
votes
0
replies
627
views
ION TORRENT data alignment
alignment
torrent
sequencing
ion
3.1 years ago by
deniselavezzari
• 0
0
votes
0
replies
529
views
GATK minimum frequency to call variant
calling
gatk
exome
variant
3.3 years ago by
deniselavezzari
• 0
0
votes
0
replies
947
views
Fold80 Penalty value vs PCT > 0.2*mean
NGS
metrics
3.6 years ago by
deniselavezzari
• 0
0
votes
0
replies
741
views
Tabix position and alternative allele
alternative
allele
tabix
variants
3.7 years ago by
deniselavezzari
• 0
0
votes
0
replies
1.1k
views
Comment:
C: Supplementary aligments in VAF
4.4 years ago by
deniselavezzari
• 0
0
votes
3
replies
1.1k
views
Supplementary aligments in VAF
alignment
sequencing
genome
snp
frequency
4.4 years ago by
deniselavezzari
• 0
0
votes
2
replies
1.2k
views
SNP index definition
sequencing
next-gen
alignment
updated 4.5 years ago by
ahmad mousavi
▴ 800 • written 4.5 years ago by
deniselavezzari
• 0
0
votes
0
replies
864
views
Best way to deal with chimeric reads?
sequencing
alignment
Illumina
Short-reads
chimera
4.6 years ago by
deniselavezzari
• 0
0
votes
1
reply
1.0k
views
Comment:
C: Multiple VCF filtering
5.0 years ago by
deniselavezzari
• 0
2
votes
3
replies
1.0k
views
Multiple VCF filtering
exom
illumina
wgs
vcf
updated 5.0 years ago by
Ram
45k • written 5.0 years ago by
deniselavezzari
• 0
0
votes
0
replies
3.6k
views
Comment:
C: How to take in consideration UMI in WES pipeline?
5.2 years ago by
deniselavezzari
• 0
2
votes
2
replies
1.0k
views
VCF comparison: shared variants
snp
sequencing
SNP
genome
updated 5.2 years ago by
Biostar
20 • written 5.3 years ago by
deniselavezzari
• 0
1
vote
1
reply
1.8k
views
How to analyze DNA data with UMI
next-gen-sequencing
umi
updated 2.0 years ago by
Ram
45k • written 5.2 years ago by
deniselavezzari
• 0
0
votes
0
replies
1.1k
views
BWA MEM paramenter
alignment
sequencing
updated 2.0 years ago by
Ram
45k • written 5.3 years ago by
deniselavezzari
• 0
0
votes
0
replies
1.2k
views
Comment:
C: Create a gold standard
5.8 years ago by
deniselavezzari
• 0
3
votes
3
replies
1.2k
views
Create a gold standard
genome
5.8 years ago by
deniselavezzari
• 0
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