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Comment: Comment: Extract CDS from maker gff
20 months ago by mrmrwinter ▴ 30
0
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0
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565
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Comment: Comment: Indel size seemingly capped by software?
2.4 years ago by mrmrwinter ▴ 30
0
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1
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565
views
Indel size seemingly capped by software?
indels calling nucmer variant genome alignment
2.4 years ago by mrmrwinter ▴ 30
0
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1
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1.9k
views
Comment: Comment: Keep lines that dont match awk pattern, edit those that do
2.6 years ago by mrmrwinter ▴ 30
3
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7
replies
1.9k
views
Keep lines that dont match awk pattern, edit those that do
bash awk sed
updated 2.6 years ago by 21k • written 2.6 years ago by ▴ 30
0
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1
reply
1.9k
views
Comment: Comment: Keep lines that dont match awk pattern, edit those that do
2.6 years ago by mrmrwinter ▴ 30
0
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0
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1.8k
views
Comment: Comment: Continuing issues with MAKER and SNAP
2.7 years ago by mrmrwinter ▴ 30
0
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0
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1.9k
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Comment: Comment: Error when trying to convert exonerate output to gff3
2.7 years ago by mrmrwinter ▴ 30
0
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0
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1.8k
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Comment: Comment: Continuing issues with MAKER and SNAP
2.7 years ago by mrmrwinter ▴ 30
0
votes
0
replies
443
views
linking exons and introns when plotting from genbank file?
exons genbank plotting dna_features_viewer introns
2.7 years ago by mrmrwinter ▴ 30
0
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0
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1.6k
views
Comment: Comment: Non-standard Genbank format
2.7 years ago by mrmrwinter ▴ 30
0
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1
reply
1.8k
views
Comment: Comment: Continuing issues with MAKER and SNAP
2.7 years ago by mrmrwinter ▴ 30
2
votes
6
replies
1.8k
views
Continuing issues with MAKER and SNAP
SNAP zff gff MAKER annotation
2.7 years ago by mrmrwinter ▴ 30
0
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0
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1.6k
views
Comment: Comment: Non-standard Genbank format
2.7 years ago by mrmrwinter ▴ 30
0
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0
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2.5k
views
Answer: Answer: maker2zff error on run
2.7 years ago by mrmrwinter ▴ 30
0
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2
replies
1.6k
views
Comment: Comment: Non-standard Genbank format
2.7 years ago by mrmrwinter ▴ 30
0
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6
replies
1.6k
views
Non-standard Genbank format
biopython ugene genbank
2.7 years ago by mrmrwinter ▴ 30
1
vote
1
reply
1.6k
views
Colour tip labels in a tree based on wildcard/expression using ggtree
ggtree colour R phylogeny dendrogram
updated 3.7 years ago by 44k • written 3.7 years ago by ▴ 30
11
votes
11
replies
5.1k
views
8 follow
Forum: Best open source genome browser in 2020
genome-browser genomics
updated 20 months ago by 44k • written 4.0 years ago by ▴ 30
0
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0
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2.8k
views
Comment: C: Combining nanopore libraries
4.0 years ago by mrmrwinter ▴ 30
2
votes
4
replies
2.8k
views
Combining nanopore libraries
promethion nanopore Assembly
2.7 years ago by mrmrwinter ▴ 30
1
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0
replies
5.1k
views
Comment: Comment: Best open source genome browser in 2020
2.9 years ago by mrmrwinter ▴ 30
0
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0
replies
1.0k
views
Which ete3 format to parse a newick file with concordance values?
iqtree phylogenetics concordance factors newick
4.3 years ago by mrmrwinter ▴ 30
0
votes
1
reply
910
views
Allow for failed wildcards in Snakemake workflow
snakemake python wildcards
4.3 years ago by mrmrwinter ▴ 30
0
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1
reply
1.2k
views
Comment: C: Order assignment given family and genus level in R
4.5 years ago by mrmrwinter ▴ 30
1
vote
4
replies
1.2k
views
Order assignment given family and genus level in R
r taxomonic assignment transformation
4.5 years ago by mrmrwinter ▴ 30
0
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0
replies
3.7k
views
Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
4.7 years ago by mrmrwinter ▴ 30
0
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1
reply
3.7k
views
Comment: C: Less and less genes predicted with each iteration of SNAP/MAKER
4.7 years ago by mrmrwinter ▴ 30
3
votes
15
replies
3.7k
views
Less and less genes predicted with each iteration of SNAP/MAKER
maker annotation snap gene prediction genomics
updated 3.2 years ago by ▴ 30 • written 4.7 years ago by ▴ 30
0
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0
replies
3.9k
views
Comment: C: If loop in snakemake
4.7 years ago by mrmrwinter ▴ 30
0
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0
replies
3.9k
views
Comment: C: If loop in snakemake
4.7 years ago by mrmrwinter ▴ 30
0
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1
reply
3.9k
views
Comment: C: If loop in snakemake
4.7 years ago by mrmrwinter ▴ 30
0
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0
replies
3.9k
views
Comment: C: If loop in snakemake
4.7 years ago by mrmrwinter ▴ 30
3
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9
replies
3.9k
views
If loop in snakemake
shell snakemake if else loop
4.7 years ago by mrmrwinter ▴ 30
0
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0
replies
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
0
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0
replies
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
0
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2
replies
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
0
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0
replies
911
views
Answer: A: I want to assembly all the reads at ones in linux
4.7 years ago by mrmrwinter ▴ 30
0
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1
reply
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
0
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1
reply
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
0
votes
1
reply
2.3k
views
Comment: C: Counting CDS's in Maker output
4.7 years ago by mrmrwinter ▴ 30
5
votes
11
replies
2.3k
views
Counting CDS's in Maker output
annotation maker cds est gene prediction
updated 4.7 years ago by 8.9k • written 4.7 years ago by ▴ 30
0
votes
1
reply
848
views
Comment: C: If/Else loop for grep count
4.7 years ago by mrmrwinter ▴ 30
1
vote
4
replies
848
views
If/Else loop for grep count
grep if else python snakemake
updated 4.7 years ago by 164k • written 4.7 years ago by ▴ 30
3
votes
2
replies
980
views
Which format to download ESTs for annotation with MAKER?
genome annotation gene prediction
updated 4.7 years ago by 8.9k • written 4.7 years ago by ▴ 30
0
votes
0
replies
692
views
Comment: C: How to omit certain results from GenBank search?
4.7 years ago by mrmrwinter ▴ 30
1
vote
2
replies
692
views
How to omit certain results from GenBank search?
genbank omission annotation protein database
4.7 years ago by mrmrwinter ▴ 30
3
votes
2
replies
2.5k
views
Error: NCBI C++ Exception - Invalid choice selection: NCBI-Seqalign::Score.value.real
blast ncbi terminal software error seqalign
updated 3.2 years ago by • 0 • written 5.1 years ago by ▴ 30
0
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0
replies
10k
views
Comment: C: remote blast requires installation of taxdb database
5.1 years ago by mrmrwinter ▴ 30
0
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0
replies
2.7k
views
Comment: C: NCBI blastp fails with "Invalid choice selection: NCBI-Seqalign::Score.value.rea
5.1 years ago by mrmrwinter ▴ 30
50 results • Page 1 of 1
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