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3
votes
2
replies
3.2k
views
How Reliable Are Statistics Derived From "Subsampling" Of Paired-End Illumina Reads ?
illumina
updated 5.3 years ago by 20 • written 12.5 years ago by ▴ 550
14
votes
4
replies
19k
views
How to extract reads in a specific region from a BAM file and also their mates mapped elsewhere ?
reads mate bam
updated 3.4 years ago by 45k • written 10.8 years ago by ▴ 550
11
votes
5
replies
8.4k
views
Validated CNV dataset for NA12878
ngs cnv
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 550
35
votes
5
replies
32k
views
How To Find Major And Minor Alleles From Dbsnp ?
dbsnp allele
updated 3.2 years ago by 45k • written 12.5 years ago by ▴ 550
0
votes
0
replies
7.7k
views
Comment: Comment: Which Pipeline To Analyze Dnase-Seq For Significant Regulatory-Region Finding?
updated 3.2 years ago by 45k • written 10.5 years ago by ▴ 550
1
vote
3
replies
4.4k
views
Tophat 1.4 Output (Accepted_Hits.Bam)
tophat output bam
updated 10.6 years ago by 20 • written 12.5 years ago by ▴ 550
11
votes
1
reply
11k
views
Ht-Seq Read Count And Strand-Specificity
htseq read counts strand rna
updated 11.9 years ago by 5.2k • written 11.9 years ago by ▴ 550
3
votes
3
replies
5.1k
views
Concordance Between Ngs Snp Calls And Genotype Snp Arrays
ngs snp genotype array
updated 2.2 years ago by 45k • written 11.9 years ago by ▴ 550
1
vote
1
reply
9.9k
views
Answer: A: Question : Plotting Per Chromosome/All Chromosome Coverage From Ngs Bam File
12.0 years ago by thecuriousbiologist ▴ 550
5
votes
6
replies
9.9k
views
Question : Plotting Per Chromosome/All Chromosome Coverage From Ngs Bam File
chromosome coverage plot
12.0 years ago by thecuriousbiologist ▴ 550
0
votes
0
replies
9.9k
views
Comment: C: Question : Plotting Per Chromosome/All Chromosome Coverage From Ngs Bam File
12.0 years ago by thecuriousbiologist ▴ 550
12
votes
4
replies
4.8k
views
Plotting Exon Statistics In R
exon r
updated 12.2 years ago by ▴ 540 • written 12.2 years ago by ▴ 550
24
votes
14
replies
27k
views
13 follow
Calculate Per Exon/Per Gene Coverage
coverage gene exon
updated 23 months ago by • 0 • written 12.2 years ago by ▴ 550
0
votes
1
reply
2.9k
views
Comment: C: Calculating Coverage From Pileup File To Find Gene Duplication Events
12.4 years ago by thecuriousbiologist ▴ 550
1
vote
3
replies
2.9k
views
Calculating Coverage From Pileup File To Find Gene Duplication Events
pileup coverage gene
updated 12.4 years ago by ★ 3.0k • written 12.4 years ago by ▴ 550
20
votes
11
replies
17k
views
6 follow
Fastq Quality Read And Score Length Check
fastq sequence quality length
updated 12.4 years ago by 11k • written 12.4 years ago by ▴ 550
0
votes
1
reply
4.4k
views
Comment: C: Tophat 1.4 Output (Accepted_Hits.Bam)
12.5 years ago by thecuriousbiologist ▴ 550
18
votes
12
replies
7.7k
views
Which Column Of A Vcf File Indicates The Reference Allele?
vcf reference allele
updated 12.6 years ago by 14k • written 12.6 years ago by ▴ 550
0
votes
2
replies
7.7k
views
Comment: C: Which Column Of A Vcf File Indicates The Reference Allele?
12.6 years ago by thecuriousbiologist ▴ 550
0
votes
1
reply
7.7k
views
Comment: C: Which Column Of A Vcf File Indicates The Reference Allele?
12.6 years ago by thecuriousbiologist ▴ 550
0
votes
0
replies
7.7k
views
Comment: C: Which Column Of A Vcf File Indicates The Reference Allele?
12.6 years ago by thecuriousbiologist ▴ 550
0
votes
0
replies
7.7k
views
Comment: C: Which Column Of A Vcf File Indicates The Reference Allele?
12.6 years ago by thecuriousbiologist ▴ 550
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