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How to run BOLT-LMM against a Plink simulated dataset?
BOLT-LMM PLINK
4.6 years ago by b.ambrozio ▴ 30
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0
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770
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How to extract the classification/regression metrics from a GWAS so that I can compare different tools?
plink SAIGE GCTA BOLT-LMM metrics
4.6 years ago by b.ambrozio ▴ 30
3
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1.7k
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How to simulate phenotype from real genetic data for GWAS purpose?
gcta plink
updated 4.7 years ago by ▴ 30 • written 4.7 years ago by ▴ 30
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0
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40k
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Answer: A: how to remove multiallelic from VCF
4.7 years ago by b.ambrozio ▴ 30
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871
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Comment: C: How to simulate 100k samples having 40 million SNPs in a proportion of case:cont
4.8 years ago by b.ambrozio ▴ 30
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3
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871
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How to simulate 100k samples having 40 million SNPs in a proportion of case:control=30:70?
plink gwas
updated 4.8 years ago by 12k • written 4.8 years ago by ▴ 30
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2
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2.5k
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What is the state of the art for GWAS in terms of statistical algorithm for either Case/control and Quantitative traits?
GWAS LMM
updated 5.0 years ago by 11k • written 5.0 years ago by ▴ 30
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1
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2.1k
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Answer: A: Any fast way to download 1000 Genome Phase 3?
5.1 years ago by b.ambrozio ▴ 30
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4
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2.1k
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Any fast way to download 1000 Genome Phase 3?
aspera fasp 1000genomes
5.1 years ago by b.ambrozio ▴ 30
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1
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1.5k
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Any practical example/tutorial on how to simulate phenotypes from 1000 Genomes?
GCTA 1000Genomes
5.1 years ago by b.ambrozio ▴ 30
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