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Comment: C: Why VarScan cannot call variants which appear in 1000genome
9.4 years ago by poisonAlien ★ 3.2k
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1
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3.3k
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Comment: Comment: targeted bed file average coverage
updated 23 months ago by 44k • written 9.4 years ago by ★ 3.2k
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1
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4.5k
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Comment: Comment: Is the read length of BGI/ CompleteGenomics Revolocity long enough to compete wi
updated 23 months ago by 44k • written 9.5 years ago by ★ 3.2k
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1
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3.1k
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Answer: Answer: retrieving probeset ID of a gene from affymetrix database or anywhere alse
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
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Answer: Answer: Clinical utilization of NGS data in cancer research
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
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0
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3.8k
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Comment: C: 1000G high coverage depth of sequencing?
9.5 years ago by poisonAlien ★ 3.2k
1
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3.0k
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Comment: Comment: Breast cancer TCGA data - DGE analysis
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
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0
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4.2k
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Comment: Comment: Spliced aligners for RNA-seq
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
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0
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1.7k
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Answer: Answer: data pre-proccessing and matrix building in R
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
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0
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34k
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Answer: Answer: Help a graduate student going into Bioinformatics looking for a new personal lap
updated 22 months ago by 44k • written 9.5 years ago by ★ 3.2k
7
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1
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Answer: Answer: Any database on cancer related snp information
updated 21 months ago by 44k • written 9.6 years ago by ★ 3.2k
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3.2k
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Comment: C: RNA-seq: how big should be the library?
9.6 years ago by poisonAlien ★ 3.2k
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1
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2.6k
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Comment: C: Why does Biostars look awkward in Chrome / Chromium
9.6 years ago by poisonAlien ★ 3.2k
1
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2
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3.4k
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Comment: C: Need suggestions for rna-seq pipeline.
9.6 years ago by poisonAlien ★ 3.2k
1
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1
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9.2k
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Answer: Answer: What is the best practice for BAM sorting?
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
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1
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3.1k
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Comment: Comment: Which Somatic SNP Callers to Benchmark?
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
2
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1
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14k
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Comment: Comment: Peak Calling with MACS (treat and control samples)
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
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0
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3.8k
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Comment: Comment: Gene Ontology enrichment
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
0
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1
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14k
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Comment: Comment: Peak Calling with MACS (treat and control samples)
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
0
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1
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14k
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Comment: Comment: Peak Calling with MACS (treat and control samples)
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 3.2k
1
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0
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18k
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Answer: Answer: GSEA Preranked analysis on RNA-SEQ
updated 2.4 years ago by 44k • written 9.7 years ago by ★ 3.2k
3
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0
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2.5k
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Answer: Answer: An R function for fetching SNP annotations?
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 3.2k
2
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2
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2.6k
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Answer: Answer: Mapping a de novo built transcriptome to a reference transcriptome
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 3.2k
0
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1
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2.3k
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Comment: Comment: ABSOLUTE warning on cbs output
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 3.2k
0
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1
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3.2k
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Comment: C: how can I use Lumi package for GSE31699 file?
9.7 years ago by poisonAlien ★ 3.2k
1
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0
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2.1k
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Comment: C: determining what human reference genome a bam is aligned against
9.7 years ago by poisonAlien ★ 3.2k
0
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0
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3.3k
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Answer: Answer: Varscan 2 output
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 3.2k
1
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0
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4.6k
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Comment: Comment: Confusion regarding selection of TCGA maf files for analysis
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 3.2k
0
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2
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4.6k
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Comment: C: Confusion regarding selection of TCGA maf files for analysis
9.7 years ago by poisonAlien ★ 3.2k
0
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1
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3.1k
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Comment: Comment: Filter MuTect before running MutSig?
updated 2.6 years ago by 44k • written 9.7 years ago by ★ 3.2k
0
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0
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2.6k
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Comment: Comment: Can a gene only expresses as a lncRNA？
updated 2.6 years ago by 44k • written 9.7 years ago by ★ 3.2k
0
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1
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3.1k
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Comment: C: Filter MuTect before running MutSig?
9.7 years ago by poisonAlien ★ 3.2k
0
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0
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6.1k
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Comment: C: extract sequences ID from a fasta file
9.8 years ago by poisonAlien ★ 3.2k
0
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1
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6.1k
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Comment: C: extract sequences ID from a fasta file
9.8 years ago by poisonAlien ★ 3.2k
1
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0
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2.7k
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Comment: Comment: How can I detect false positive deletion in the output of Pindel tool?
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 3.2k
0
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1
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2.7k
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Answer: A: How can I detect false positive deletion in the output of Pindel tool?
9.8 years ago by poisonAlien ★ 3.2k
2
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3
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2.6k
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Comment: C: RNA seq analysis
9.8 years ago by poisonAlien ★ 3.2k
1
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0
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2.7k
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Answer: Answer: count reference and alllele frequency from exome-seq bam
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 3.2k
0
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0
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11k
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Comment: Comment: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 3.2k
0
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0
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2.5k
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Comment: C: How to generate FPKM values for Velvet/Oases assembled transcripts
9.8 years ago by poisonAlien ★ 3.2k
0
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1
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11k
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Comment: Comment: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 3.2k
0
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1
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2.5k
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Comment: C: How to generate FPKM values for Velvet/Oases assembled transcripts
9.8 years ago by poisonAlien ★ 3.2k
0
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1
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3.0k
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Comment: C: Alternative microarray analysis
9.8 years ago by poisonAlien ★ 3.2k
2
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0
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1.6k
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Answer: Answer: Dedicated microarray analysis
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
2
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0
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12k
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Answer: Answer: Map genetic mutations to protein domain/structure
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
3
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0
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5.1k
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Comment: Comment: How can I summarize sequence search pattern using 'grep' on a single file contai
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
0
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1
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4.8k
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Comment: Comment: questions on rna-seq data analysis
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
0
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1
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4.8k
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Comment: Comment: questions on rna-seq data analysis
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
2
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5
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4.8k
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questions on rna-seq data analysis
deseq2 htseq-count cufflinks fpkm RNA-Seq
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 3.2k
0
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0
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4.6k
views
Comment: C: Adapter trimming tool for Windows?
10.0 years ago by poisonAlien ★ 3.2k
308 results • Page 5 of 7
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