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Pacbio Longread Depth of coverage
longread pacbio coverage
updated 16 months ago by • 0 • written 16 months ago by ▴ 520
0
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1
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5.7k
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Comment: Comment: Output per variant and per sample heterozygosity fraction from VCF.
3.8 years ago by hellbio ▴ 520
0
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0
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18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.4 years ago by hellbio ▴ 520
0
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0
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18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.4 years ago by hellbio ▴ 520
0
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1
reply
18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.4 years ago by hellbio ▴ 520
0
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1
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18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.5 years ago by hellbio ▴ 520
0
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0
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18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.5 years ago by hellbio ▴ 520
0
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1
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18k
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Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.5 years ago by hellbio ▴ 520
0
votes
1
reply
18k
views
Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.5 years ago by hellbio ▴ 520
0
votes
1
reply
18k
views
Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
4.5 years ago by hellbio ▴ 520
0
votes
2
replies
3.3k
views
CNV tools for mitochondrial chromosome using whole-genome sequencing
cnv chrMT
updated 5.3 years ago by • 0 • written 9.1 years ago by ▴ 520
1
vote
1
reply
1.5k
views
How to FLAG low quality SNPs in samtools VCF
samtools VCF
updated 5.4 years ago by 20 • written 5.5 years ago by ▴ 520
0
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1
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6.5k
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Comment: C: Percentage Of Exons Covered
updated 5.5 years ago by 45k • written 12.0 years ago by ▴ 520
0
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1
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4.3k
views
Comment: C: How to get sample names based on genotype from multi-sample vcf file
updated 5.5 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
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4.3k
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Comment: C: How to get sample names based on genotype from multi-sample vcf file
updated 5.5 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
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4.3k
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Comment: C: How to get sample names based on genotype from multi-sample vcf file
updated 5.5 years ago by 45k • written 9.6 years ago by ▴ 520
0
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2
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4.3k
views
Comment: C: How to get sample names based on genotype from multi-sample vcf file
updated 5.5 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
reply
9.4k
views
Comment: C: How to Collapse Bedtools reciprocal overlap regions
updated 5.6 years ago by 45k • written 9.6 years ago by ▴ 520
0
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0
replies
9.4k
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Comment: C: How to Collapse Bedtools reciprocal overlap regions
updated 5.6 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
reply
9.4k
views
Comment: C: How to Collapse Bedtools reciprocal overlap regions
updated 5.6 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
reply
9.4k
views
Comment: C: How to Collapse Bedtools reciprocal overlap regions
updated 5.6 years ago by 45k • written 9.6 years ago by ▴ 520
0
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1
reply
2.5k
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Comment: C: SNP Count from telomeres in sliding window
6.4 years ago by hellbio ▴ 520
0
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1
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2.5k
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Comment: C: SNP Count from telomeres in sliding window
6.4 years ago by hellbio ▴ 520
0
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1
reply
2.5k
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Comment: C: SNP Count from telomeres in sliding window
6.4 years ago by hellbio ▴ 520
0
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1
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2.5k
views
Comment: C: SNP Count from telomeres in sliding window
6.4 years ago by hellbio ▴ 520
1
vote
10
replies
2.5k
views
SNP Count from telomeres in sliding window
genome SNP
updated 6.4 years ago by 36k • written 6.4 years ago by ▴ 520
0
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0
replies
1.6k
views
Comment: C: Mendelian Inheritance Rate (CNV)
6.8 years ago by hellbio ▴ 520
1
vote
1
reply
1.8k
views
Human CNV VCF for Trios from whole-genomes
cnv wgs trios
updated 6.8 years ago by ★ 1.9k • written 6.8 years ago by ▴ 520
57
votes
35
replies
18k
views
9 follow
How to get sample names and genotype for SNP in multi-sample VCF file
SNP genotype GATK
updated 20 months ago by 89k • written 7.3 years ago by ▴ 520
0
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0
replies
8.3k
views
Comment: C: Genotype count in a VCF file
7.1 years ago by hellbio ▴ 520
0
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1
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8.3k
views
Comment: C: Genotype count in a VCF file
7.1 years ago by hellbio ▴ 520
0
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0
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8.3k
views
Comment: C: Genotype count in a VCF file
7.1 years ago by hellbio ▴ 520
0
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2
replies
18k
views
Comment: C: How to get sample names and genotype for SNP in multi-sample VCF file
7.3 years ago by hellbio ▴ 520
1
vote
1
reply
2.8k
views
How to filter VCF where at least x% of the individuals have DP>=10 and GQ>=20
vcf filter gatk
updated 7.4 years ago by 166k • written 7.4 years ago by ▴ 520
23
votes
5
replies
41k
views
Create VCF file from .bim, .fam and .bed file
plinkseq SNP vcf
updated 3.5 years ago by 45k • written 10.9 years ago by ▴ 520
0
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1
reply
2.3k
views
Phylogeny from Genotype Count data using MEGA
phylogeny mega
updated 2.9 years ago by 45k • written 9.4 years ago by ▴ 520
0
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0
replies
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
0
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0
replies
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
0
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1
reply
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
0
votes
1
reply
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
0
votes
1
reply
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
0
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1
reply
3.2k
views
Comment: C: Picard FilterVcf Javascript Usage
8.1 years ago by hellbio ▴ 520
1
vote
10
replies
3.2k
views
Picard FilterVcf Javascript Usage
picard filtervcf javascript
updated 8.2 years ago by 166k • written 8.2 years ago by ▴ 520
0
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0
replies
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
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0
replies
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
votes
1
reply
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
votes
1
reply
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
votes
0
replies
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
votes
1
reply
3.4k
views
Comment: C: SelectVariant JEXL expression to select private variants from multisample VCF
8.6 years ago by hellbio ▴ 520
0
votes
10
replies
3.4k
views
SelectVariant JEXL expression to select private variants from multisample VCF
gatk jexl
updated 8.6 years ago by 166k • written 8.6 years ago by ▴ 520
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