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2.2k
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Generate VCF from different .bam files with different chromosome names
bcftools mpileup vcf
updated 17 months ago by 45k • written 5.2 years ago by • 0
0
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0
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788
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Comment: Comment: Clarify interpretation of slash (/) and vertical pipe (|) in GATK's vcf output?
3.0 years ago by evoclive • 0
0
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2
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788
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Clarify interpretation of slash (/) and vertical pipe (|) in GATK's vcf output?
VCF GATK formatting
3.0 years ago by evoclive • 0
0
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1
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1.3k
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Comment: Comment: GATK based variant calling yields excessive Indels
3.0 years ago by evoclive • 0
0
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1
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1.3k
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Comment: Comment: GATK based variant calling yields excessive Indels
3.0 years ago by evoclive • 0
3
votes
5
replies
1.3k
views
GATK based variant calling yields excessive Indels
indels calling GATK variant PICARD
updated 3.0 years ago by 166k • written 3.0 years ago by • 0
0
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2
replies
2.5k
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Comment: Comment: Strange Trimmomatic behavior
3.1 years ago by evoclive • 0
0
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0
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2.5k
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Comment: Comment: Strange Trimmomatic behavior
3.1 years ago by evoclive • 0
0
votes
1
reply
2.5k
views
Comment: Comment: Strange Trimmomatic behavior
3.1 years ago by evoclive • 0
0
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1
reply
2.5k
views
Comment: Comment: Strange Trimmomatic behavior
3.1 years ago by evoclive • 0
4
votes
14
replies
2.5k
views
Strange Trimmomatic behavior
Trimmomatic
updated 3.1 years ago by 15k • written 3.1 years ago by • 0
0
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0
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822
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Comment: Comment: Gene annotation for Andrographis paniculata
3.5 years ago by evoclive • 0
2
votes
2
replies
822
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Gene annotation for Andrographis paniculata
paniculata annotation Andrographis
3.5 years ago by evoclive • 0
0
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0
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649
views
RADseq processing parameters vs. data quality
Stacks RADseq assembly
updated 4.4 years ago by 20 • written 4.5 years ago by • 0
0
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0
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1.2k
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Comment: C: Primer3 not finding microsatellite primers from reference genome
5.0 years ago by evoclive • 0
0
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2
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1.2k
views
Primer3 not finding microsatellite primers from reference genome
Primer3 MISA Microsatellites SSR
5.0 years ago by evoclive • 0
0
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2
replies
1.8k
views
Generating input file for Primer3 using p3_in.pl (MISA)
Primer3 MISA SSR
5.0 years ago by evoclive • 0
0
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0
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1.8k
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Comment: C: Generating input file for Primer3 using p3_in.pl (MISA)
5.0 years ago by evoclive • 0
0
votes
1
reply
1.9k
views
Hardy Weinberg Equilibrium in GWAS
SNP genome GWAS Hardy-Weinberg
updated 5.5 years ago by 89k • written 5.5 years ago by • 0
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