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1
vote
1
reply
539
views
Process Truncated fastq file
fastqc fastq
updated 12 months ago by 147k • written 12 months ago by ▴ 160
1
vote
3
replies
695
views
Zero Mapping rate
bowtie mapping
updated 15 months ago by ★ 1.8k • written 15 months ago by ▴ 160
3
votes
1
reply
697
views
Fastqc lsequence duplication and per base sequence content failed
RNA-seq fastqc
updated 20 months ago by 147k • written 20 months ago by ▴ 160
0
votes
1
reply
678
views
Genes near SNP within certain window frame and distance
bedops bedtools
updated 20 months ago by 44k • written 20 months ago by ▴ 160
0
votes
1
reply
631
views
Compare population structure results
plots circlize dendextend R
updated 22 months ago by ▴ 120 • written 22 months ago by ▴ 160
0
votes
1
reply
1.0k
views
Modify color in pie charts on a geographical map
ggplot
24 months ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
1.0k
views
Answer: Answer: Modify color in pie charts on a geographical map
24 months ago by waqaskhokhar999 ▴ 160
4
votes
4
replies
3.2k
views
strandness of paired-end data
RNA-Seq featureCounts
updated 2.0 years ago by ★ 4.3k • written 6.1 years ago by ▴ 160
3
votes
10
replies
2.5k
views
Run ASTALAVISTA for large number of files
RNA-Seq alternative splicing
updated 2.0 years ago by • 0 • written 5.2 years ago by ▴ 160
0
votes
0
replies
502
views
Number of PCA for GWAS
GWAS PCA
2.1 years ago by waqaskhokhar999 ▴ 160
1
vote
1
reply
767
views
Heatmap of samples without replicates
Heatmap
updated 2.2 years ago by ★ 1.8k • written 2.2 years ago by ▴ 160
1
vote
6
replies
3.2k
views
Convert the genotype format from numeric to letters
SNP vcf
updated 2.3 years ago by • 0 • written 5.5 years ago by ▴ 160
0
votes
0
replies
588
views
Change colors of each histogram in correlation and phenotypic distribution plot
Histogram
2.3 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
836
views
Comment: Comment: Stringtie skips some reference genes
2.3 years ago by waqaskhokhar999 ▴ 160
0
votes
2
replies
836
views
Stringtie skips some reference genes
Stringtie Assembly RNA-seq
2.3 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
7.4k
views
Comment: Comment: How to make Q-Q plots for different models at a single chart using R?
3.1 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
1.5k
views
Minor Allele Frequency (MAF) Filtering differences: Gappet vs Tassel
MAF GWAS
updated 3.4 years ago by 147k • written 3.4 years ago by ▴ 160
0
votes
0
replies
2.1k
views
Comment: C: Plot GWAS p value distribution for multiple traits
4.2 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
2.1k
views
Comment: C: Plot GWAS p value distribution for multiple traits
4.2 years ago by waqaskhokhar999 ▴ 160
0
votes
5
replies
2.1k
views
Plot GWAS p value distribution for multiple traits
GWAS Plotting R
4.2 years ago by waqaskhokhar999 ▴ 160
1
vote
2
replies
857
views
Indentify character and keep corressponding character from bottom two rows
RNA-Seq
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 160
1
vote
2
replies
862
views
Combine fasta files by matching partial header in specific format
RNA-Seq
4.7 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
1.4k
views
Comment: C: Replace ambigious nucleotide with correct nucleotides
4.7 years ago by waqaskhokhar999 ▴ 160
3
votes
4
replies
1.4k
views
Replace ambigious nucleotide with correct nucleotides
next-gen RNA-Seq
updated 4.7 years ago by 44k • written 4.7 years ago by ▴ 160
0
votes
1
reply
1.9k
views
Comment: C: Replace Ambigious codons with Amino acid sequences
updated 4.7 years ago by 44k • written 4.7 years ago by ▴ 160
2
votes
8
replies
1.9k
views
Replace Ambigious codons with Amino acid sequences
RNA-Seq sequence
updated 4.7 years ago by 10k • written 4.7 years ago by ▴ 160
0
votes
0
replies
16k
views
Comment: Comment: How to extract the longest orf?
updated 3.1 years ago by 44k • written 4.7 years ago by ▴ 160
0
votes
1
reply
1.9k
views
Extract longest ORF
RNA-Seq
updated 4.7 years ago by ▴ 1000 • written 4.7 years ago by ▴ 160
0
votes
0
replies
1.2k
views
Comment: C: Alternative of ORFFinder for multiple nucleotide sequences
4.8 years ago by waqaskhokhar999 ▴ 160
2
votes
2
replies
1.2k
views
Alternative of ORFFinder for multiple nucleotide sequences
RNA-Seq ORF translation
updated 4.8 years ago by 147k • written 4.8 years ago by ▴ 160
0
votes
1
reply
964
views
Comment: C: Find gene ids based on genome coordinates
5.1 years ago by waqaskhokhar999 ▴ 160
0
votes
3
replies
964
views
Find gene ids based on genome coordinates
RNA-Seq gene
5.1 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
2.5k
views
Comment: C: Run ASTALAVISTA for large number of files
5.1 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
2.5k
views
Comment: C: Run ASTALAVISTA for large number of files
5.1 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
2.5k
views
Comment: C: Run ASTALAVISTA for large number of files
5.2 years ago by waqaskhokhar999 ▴ 160
11
votes
9
replies
2.1k
views
Remove overlap between Exon and UTR boundaries
RNA-Seq exon UTR
updated 5.2 years ago by 13k • written 5.2 years ago by ▴ 160
0
votes
0
replies
2.1k
views
Comment: C: Remove overlap between Exon and UTR boundaries
5.2 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
2.1k
views
Comment: C: Remove overlap between Exon and UTR boundaries
5.2 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
2.1k
views
Comment: C: Remove overlap between Exon and UTR boundaries
5.2 years ago by waqaskhokhar999 ▴ 160
0
votes
0
replies
1.8k
views
Comment: C: Splicing QTL plot
5.2 years ago by waqaskhokhar999 ▴ 160
1
vote
3
replies
1.8k
views
Splicing QTL plot
sQTL SNP ggplots R
updated 5.2 years ago by 12k • written 5.2 years ago by ▴ 160
0
votes
1
reply
1.1k
views
plot snps on chromosomes
snps plot
5.2 years ago by waqaskhokhar999 ▴ 160
0
votes
2
replies
19k
views
Comment: A: How to run the Deseq2 tool without replicates.
5.2 years ago by waqaskhokhar999 ▴ 160
5
votes
2
replies
1.6k
views
Filter transcripts based on CDS length
RNA-Seq annotation
updated 5.2 years ago by ▴ 730 • written 5.2 years ago by ▴ 160
0
votes
1
reply
1.8k
views
Comment: C: Identify transcripts code for longest protein from gene annotation file
5.3 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
1.8k
views
Comment: C: Identify transcripts code for longest protein from gene annotation file
5.3 years ago by waqaskhokhar999 ▴ 160
1
vote
5
replies
1.8k
views
Identify transcripts code for longest protein from gene annotation file
RNA-Seq Reference annotation file
updated 5.3 years ago by 13k • written 5.3 years ago by ▴ 160
5
votes
4
replies
2.0k
views
Convert intron coordinates to gene names
RNA-Seq sqtl
updated 5.3 years ago by 36k • written 5.3 years ago by ▴ 160
0
votes
0
replies
9.2k
views
Comment: C: Plotting Exons Of A Transcript Using Bioconductor Genomegraphs
5.3 years ago by waqaskhokhar999 ▴ 160
0
votes
1
reply
1.3k
views
Comment: C: Overlap between ranges
5.4 years ago by waqaskhokhar999 ▴ 160
99 results • Page 1 of 2
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