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6
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10
replies
2.1k
views
Automated way to pull representative/RefSeq genome using full species name?
ncbi taxonomy refseq
updated 2.0 years ago by 4.7k • written 2.1 years ago by ★ 2.1k
0
votes
0
replies
809
views
Job: Senior Bioinformatician at Wellcome Sanger Institute
UK Sanger
updated 18 months ago by 44k • written 2.3 years ago by ★ 2.1k
0
votes
1
reply
37k
views
Comment: Comment: Duplicates on Illumina
2.3 years ago by predeus ★ 2.1k
0
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1
reply
2.5k
views
Comment: Comment: bbduk paired-end RNA-seq trimming command
2.3 years ago by predeus ★ 2.1k
4
votes
3
replies
2.5k
views
bbduk paired-end RNA-seq trimming command
rna-seq paired-end bbduk trimming adapter
updated 2.3 years ago by 148k • written 2.3 years ago by ★ 2.1k
0
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1
reply
4.1k
views
Answer: Answer: SCTransform and differential gene expression
2.3 years ago by predeus ★ 2.1k
2
votes
0
replies
2.0k
views
Comment: Comment: Which aligner for human WGS
2.4 years ago by predeus ★ 2.1k
0
votes
0
replies
1.2k
views
Comment: Comment: Specific case of "bedtools intersect"
2.7 years ago by predeus ★ 2.1k
2
votes
4
replies
1.2k
views
Specific case of "bedtools intersect"
bedtools BAM
updated 18 months ago by 44k • written 2.7 years ago by ★ 2.1k
0
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1
reply
7.6k
views
Comment: Comment: GEO datasets-Single cell RNAseq analysis using seurat
2.8 years ago by predeus ★ 2.1k
0
votes
0
replies
808
views
Comment: Comment: Sequence parsing question
2.8 years ago by predeus ★ 2.1k
1
vote
3
replies
808
views
Sequence parsing question
seqtk fastq sequence parsing
updated 2.8 years ago by 21k • written 2.8 years ago by ★ 2.1k
0
votes
0
replies
2.2k
views
Answer: Answer: Issues with Quantification with STARsolo
2.9 years ago by predeus ★ 2.1k
3
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1
reply
3.2k
views
Answer: Answer: RNA velocity for smart-seq2 dataset
3.0 years ago by predeus ★ 2.1k
0
votes
0
replies
1.2k
views
Comment: Comment: Tools similar to entrez-direct for ENA?
3.0 years ago by predeus ★ 2.1k
2
votes
3
replies
1.2k
views
Tools similar to entrez-direct for ENA?
SRA Entrez-direct ENA Entrez
3.0 years ago by predeus ★ 2.1k
0
votes
0
replies
3.8k
views
Comment: Comment: Tell us what you think of the ENA browser?
3.0 years ago by predeus ★ 2.1k
0
votes
0
replies
2.2k
views
Comment: Comment: A guide to modern genome assembly
3.3 years ago by predeus ★ 2.1k
0
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0
replies
2.2k
views
Comment: Comment: A guide to modern genome assembly
3.3 years ago by predeus ★ 2.1k
6
votes
10
replies
2.2k
views
A guide to modern genome assembly
long-reads illumina genome-assembly
updated 8 months ago by 44k • written 3.3 years ago by ★ 2.1k
0
votes
0
replies
1.4k
views
Comment: Comment: Cell cycle genes for D. melanogaster and C. elegans (for scRNA-seq analysis)
3.3 years ago by predeus ★ 2.1k
4
votes
3
replies
1.4k
views
Cell cycle genes for D. melanogaster and C. elegans (for scRNA-seq analysis)
cycle-correction single-cell regression scRNA-seq bias
updated 3.3 years ago by 9.0k • written 3.3 years ago by ★ 2.1k
1
vote
3
replies
1.4k
views
scRNAseq - infer type of single-cell chemistry from fastq
scRNA-seq single cell RNA-Seq
updated 3.3 years ago by • 0 • written 3.9 years ago by ★ 2.1k
0
votes
0
replies
1.1k
views
Comment: Comment: WGS bacterial metagenomic pipeline - group comparison
3.3 years ago by predeus ★ 2.1k
1
vote
2
replies
1.1k
views
WGS bacterial metagenomic pipeline - group comparison
metagenomics WGS pipeline bacterial
3.3 years ago by predeus ★ 2.1k
0
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0
replies
2.0k
views
Comment: Comment: Can I sort my bam files with Picard MergeSamFiles?
3.3 years ago by predeus ★ 2.1k
0
votes
0
replies
2.0k
views
Comment: Comment: Can I sort my bam files with Picard MergeSamFiles?
3.3 years ago by predeus ★ 2.1k
0
votes
0
replies
5.9k
views
Comment: Comment: Kraken2 with Nanopore reads
3.5 years ago by predeus ★ 2.1k
0
votes
0
replies
1.7k
views
Comment: Comment: sugestion nanopore assembly and illumina reads
3.5 years ago by predeus ★ 2.1k
1
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1
reply
1.7k
views
Answer: Answer: sugestion nanopore assembly and illumina reads
3.5 years ago by predeus ★ 2.1k
0
votes
0
replies
6.0k
views
Comment: Comment: KRAKEN2 database build with NCBI nucleotide
3.5 years ago by predeus ★ 2.1k
2
votes
2
replies
2.3k
views
Comment: Comment: Whole blood single cell RNA-seq dataset?
3.5 years ago by predeus ★ 2.1k
0
votes
0
replies
2.2k
views
Comment: Comment: Truncate unevenly covered BAM file at certain coverage
3.6 years ago by predeus ★ 2.1k
0
votes
0
replies
7.0k
views
Comment: Comment: Filtering out the spliced reads from bam file.
3.6 years ago by predeus ★ 2.1k
0
votes
0
replies
2.2k
views
Comment: Comment: Truncate unevenly covered BAM file at certain coverage
3.6 years ago by predeus ★ 2.1k
0
votes
1
reply
2.2k
views
Comment: Comment: Truncate unevenly covered BAM file at certain coverage
3.6 years ago by predeus ★ 2.1k
4
votes
9
replies
2.2k
views
Truncate unevenly covered BAM file at certain coverage
samtools bam
3.6 years ago by predeus ★ 2.1k
0
votes
1
reply
2.2k
views
Comment: Comment: Truncate unevenly covered BAM file at certain coverage
3.6 years ago by predeus ★ 2.1k
1
vote
0
replies
2.2k
views
Comment: Comment: Truncate unevenly covered BAM file at certain coverage
3.6 years ago by predeus ★ 2.1k
0
votes
0
replies
2.1k
views
Comment: Comment: AB SOLiD small RNA-seq data handling
3.7 years ago by predeus ★ 2.1k
1
vote
0
replies
2.4k
views
Answer: Answer: single cell sequencing data doublets removal tools selection
3.7 years ago by predeus ★ 2.1k
3
votes
1
reply
1.2k
views
Answer: A: TSS predator input files
3.8 years ago by predeus ★ 2.1k
4
votes
5
replies
2.3k
views
Whole blood single cell RNA-seq dataset?
RNA-Seq scRNA-Seq whole blood single cell
20 months ago by predeus ★ 2.1k
0
votes
1
reply
3.7k
views
Comment: C: Want to reverse the fasta sequence
3.8 years ago by predeus ★ 2.1k
1
vote
1
reply
989
views
Answer: A: Telomere sequence in ncbi human genome assembly?
3.8 years ago by predeus ★ 2.1k
0
votes
1
reply
3.7k
views
Answer: A: Want to reverse the fasta sequence
3.8 years ago by predeus ★ 2.1k
0
votes
1
reply
3.3k
views
Answer: A: GEOquery loading error.
3.8 years ago by predeus ★ 2.1k
1
vote
0
replies
5.3k
views
Comment: C: RNA-seq ribosomal genes vs proteins
3.8 years ago by predeus ★ 2.1k
4
votes
5
replies
5.2k
views
Version history and design files for exome kits from Agilent, Roche(Nimblegen), and Illumina
exome agilent roche nimblegen illumina
updated 3.8 years ago by ▴ 210 • written 7.1 years ago by ★ 2.1k
0
votes
1
reply
7.6k
views
Answer: A: GEO datasets-Single cell RNAseq analysis using seurat
3.8 years ago by predeus ★ 2.1k
289 results • Page 2 of 6
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