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2
votes
1
reply
5.3k
views
Answer:
A: RNA-seq ribosomal genes vs proteins
3.8 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
C: Cell type assignment for non-model organism single cell RNA-seq
3.9 years ago by
predeus
★ 2.1k
0
votes
1
reply
1.3k
views
Comment:
C: Cell type assignment for non-model organism single cell RNA-seq
3.9 years ago by
predeus
★ 2.1k
1
vote
5
replies
1.3k
views
Cell type assignment for non-model organism single cell RNA-seq
RNA-Seq
scRNA-Seq
single cell
non-model organism
3.9 years ago by
predeus
★ 2.1k
3
votes
1
reply
2.0k
views
Answer:
A: Suggest common programming tasks for biologists who are novice programmers
3.9 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
C: Best Practices for chi-seq analysis
3.9 years ago by
predeus
★ 2.1k
0
votes
1
reply
867
views
Answer:
A: Searching for human genotyping data thats not public
3.9 years ago by
predeus
★ 2.1k
1
vote
1
reply
1.1k
views
Answer:
A: Best Practices for chi-seq analysis
3.9 years ago by
predeus
★ 2.1k
0
votes
0
replies
4.1k
views
Answer:
A: Algorithm to remove batch effects
3.9 years ago by
predeus
★ 2.1k
0
votes
1
reply
2.0k
views
Answer:
A: Which aligner for human WGS
3.9 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
C: scRNAseq - infer type of single-cell chemistry from fastq
3.9 years ago by
predeus
★ 2.1k
3
votes
0
replies
1.2k
views
Answer:
A: interprating PCA plot
3.9 years ago by
predeus
★ 2.1k
1
vote
0
replies
616
views
Answer:
A: RNA Seq: Outlier gene counts
3.9 years ago by
predeus
★ 2.1k
0
votes
1
reply
6.5k
views
Comment:
C: normalization in single cell RNAseq
3.9 years ago by
predeus
★ 2.1k
0
votes
0
replies
2.7k
views
Answer:
A: Tools for scRNAseq
3.9 years ago by
predeus
★ 2.1k
1
vote
0
replies
7.4k
views
Comment:
C: How to change cellranger multimapping algorithm
4.0 years ago by
predeus
★ 2.1k
0
votes
1
reply
7.4k
views
Comment:
C: How to change cellranger multimapping algorithm
4.0 years ago by
predeus
★ 2.1k
0
votes
1
reply
7.4k
views
Comment:
A: How to change cellranger multimapping algorithm
4.0 years ago by
predeus
★ 2.1k
1
vote
0
replies
4.4k
views
Answer:
A: How to get input for provean from vcf files annotated by snpeff?
4.1 years ago by
predeus
★ 2.1k
1
vote
0
replies
4.8k
views
Comment:
C: Heatmap from the RNAseq raw count data
4.5 years ago by
predeus
★ 2.1k
1
vote
1
reply
4.8k
views
Answer:
A: Heatmap from the RNAseq raw count data
4.5 years ago by
predeus
★ 2.1k
3
votes
6
replies
2.1k
views
Get GEO microarray probe sequences by GPL ID
microarray
GEO
gene expression omnibus
4.6 years ago by
predeus
★ 2.1k
1
vote
1
reply
2.1k
views
Comment:
C: Get GEO microarray probe sequences by GPL ID
4.6 years ago by
predeus
★ 2.1k
0
votes
1
reply
2.1k
views
Comment:
C: Get GEO microarray probe sequences by GPL ID
4.6 years ago by
predeus
★ 2.1k
0
votes
0
replies
4.0k
views
Comment:
A: 16S-specific multiple alignment of rDNA sequences
4.7 years ago by
predeus
★ 2.1k
12
votes
4
replies
4.0k
views
16S-specific multiple alignment of rDNA sequences
multiple-sequence-alignment
16S
multiple-alignment
updated 19 months ago by
Ram
44k • written 4.7 years ago by
predeus
★ 2.1k
0
votes
1
reply
15k
views
Comment:
C: makeblastdb Fasta file with 25 sequences gives Error: mdb_env_open: There is no
4.7 years ago by
predeus
★ 2.1k
0
votes
0
replies
15k
views
Comment:
C: makeblastdb Fasta file with 25 sequences gives Error: mdb_env_open: There is no
4.7 years ago by
predeus
★ 2.1k
0
votes
1
reply
15k
views
Comment:
C: makeblastdb Fasta file with 25 sequences gives Error: mdb_env_open: There is no
4.7 years ago by
predeus
★ 2.1k
1
vote
3
replies
1.1k
views
Genome-scale missense variant effect predictors?
provean
sift
polyphen
missense
sift4g
4.7 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.1k
views
Comment:
C: Genome-scale missense variant effect predictors?
4.7 years ago by
predeus
★ 2.1k
0
votes
0
replies
7.7k
views
Comment:
C: (SIFT, Polyphen, PROVEAN) vs. (ANNOVAR) vs. (LOFTEE)
4.7 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
C: How can I fix frameshift errors in assembled genome?
4.8 years ago by
predeus
★ 2.1k
0
votes
0
replies
911
views
Comment:
C: Using MEME-suite to find sigma-factor binding sites (or other broad motifs)
4.8 years ago by
predeus
★ 2.1k
1
vote
2
replies
911
views
Using MEME-suite to find sigma-factor binding sites (or other broad motifs)
meme
meme-chip
meme suite
motif
chip-seq
updated 4.8 years ago by
Asaf
10k • written 4.8 years ago by
predeus
★ 2.1k
0
votes
1
reply
1.4k
views
Answer:
A: How can I fix frameshift errors in assembled genome?
4.8 years ago by
predeus
★ 2.1k
0
votes
0
replies
14k
views
Comment:
C: Modern software for whole genome alignment visualization
4.9 years ago by
predeus
★ 2.1k
0
votes
1
reply
2.3k
views
Comment:
C: optimise htseq count performance by choosing proper samtools sort options
5.0 years ago by
predeus
★ 2.1k
0
votes
0
replies
9.8k
views
Comment:
C: Too late to switch to Bioinformatics?
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
predeus
★ 2.1k
1
vote
1
reply
9.8k
views
Comment:
C: Too late to switch to Bioinformatics?
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
predeus
★ 2.1k
4
votes
2
replies
9.8k
views
Answer:
A: Too late to switch to Bioinformatics?
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
predeus
★ 2.1k
0
votes
0
replies
4.8k
views
Comment:
C: Use esearch/efetch to output relationship table of GSM to SRR (bascially SRA fil
updated 5.0 years ago by
Ram
44k • written 10.3 years ago by
predeus
★ 2.1k
1
vote
1
reply
4.8k
views
Answer:
A: Use esearch/efetch to output relationship table of GSM to SRR (bascially SRA fil
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
predeus
★ 2.1k
0
votes
1
reply
4.1k
views
Answer:
A: Tools for metagenomics classification using long reads
5.0 years ago by
predeus
★ 2.1k
0
votes
0
replies
938
views
Comment:
C: A good tutorial for eukaryotic phylogeny?
5.0 years ago by
predeus
★ 2.1k
2
votes
2
replies
938
views
A good tutorial for eukaryotic phylogeny?
phylogeny
tree
eukaryote
updated 5.0 years ago by
Vitis
★ 2.6k • written 5.0 years ago by
predeus
★ 2.1k
0
votes
0
replies
2.7k
views
Comment:
A: Help scaffolding an Illumina genome assembly with 10x reads
5.1 years ago by
predeus
★ 2.1k
0
votes
0
replies
1.9k
views
Answer:
A: Trinity RSEM Bowtie2 align_and_estimate_abundance script error
5.3 years ago by
predeus
★ 2.1k
2
votes
1
reply
3.2k
views
Answer:
A: Sequence duplication levels in de-novo assemblies
5.3 years ago by
predeus
★ 2.1k
0
votes
2
replies
1.9k
views
Answer:
A: Principal Component Analysis PCA
5.3 years ago by
predeus
★ 2.1k
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