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Comment: C: Mpileup Multiple Samples - Individual DP Values
5.1 years ago by Ks-seq ▴ 10
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Comment: C: Mpileup Multiple Samples - Individual DP Values
5.1 years ago by Ks-seq ▴ 10
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Comment: C: How to use bcftools to calculate AF INFO field from AC and AN in VCF?
5.1 years ago by Ks-seq ▴ 10
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Mpileup Multiple Samples - Individual DP Values
SNP alignment rna-seq
updated 5.1 years ago by 166k • written 5.1 years ago by ▴ 10
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Comment: A: Mpileup Multiple Samples - Individual Dp4 Values
5.1 years ago by Ks-seq ▴ 10
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2
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Comment: C: How to use bcftools to calculate AF INFO field from AC and AN in VCF?
5.1 years ago by Ks-seq ▴ 10
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Comment: C: Filter variants supported by 20% of total reads
5.1 years ago by Ks-seq ▴ 10
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30k
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Comment: C: How to use bcftools to calculate AF INFO field from AC and AN in VCF?
updated 5.1 years ago by 89k • written 5.1 years ago by ▴ 10
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957
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Comment: C: Filter variants supported by 20% of total reads
5.1 years ago by Ks-seq ▴ 10
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24k
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Comment: C: Calculating Variant Allele Frequency
5.1 years ago by Ks-seq ▴ 10
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Answer: A: samtools mpileup - how to extract the alternative allele counts for *each* alter
5.1 years ago by Ks-seq ▴ 10
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4
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957
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Filter variants supported by 20% of total reads
SNP RNA-Seq alignment sequence
updated 5.1 years ago by 166k • written 5.1 years ago by ▴ 10
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