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965
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single-end read for scRNA-seq data
scRNA-seq 10X single-end
updated 23 months ago by 87k • written 23 months ago by ▴ 10
0
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0
replies
395
views
cellranger for single nucleus RNA sequencing
genomics cellranger 10X snRNA-seq
3.1 years ago by dahun73 ▴ 10
1
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1
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1.1k
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extract only 5' information of BAM file
BAM
updated 3.8 years ago by 9.0k • written 3.8 years ago by ▴ 10
0
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1
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2.2k
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Comment: Comment: Fragment length of paired-end data
3.9 years ago by dahun73 ▴ 10
2
votes
3
replies
2.2k
views
Fragment length of paired-end data
paired-end
updated 3.9 years ago by 15k • written 3.9 years ago by ▴ 10
2
votes
1
reply
965
views
WGCNA with low number of samples
RNA-Seq WGCNA
4.1 years ago by dahun73 ▴ 10
0
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1
reply
1.1k
views
How do edgeR calculate p.value without replicates?
RNA-Seq edgeR
4.2 years ago by dahun73 ▴ 10
3
votes
1
reply
1.5k
views
Download public single-cell RNA-seq fastq from GEO
RNA-Seq single-cell
updated 4.2 years ago by 150k • written 4.2 years ago by ▴ 10
1
vote
1
reply
930
views
how to convert FASTQ to complementary sequences
RNA-Seq alignment fastq
updated 4.4 years ago by 20 • written 4.4 years ago by ▴ 10
1
vote
1
reply
768
views
Possibility of mapping opposite strand
RNA-Seq STAR FASTQ alignment
updated 4.4 years ago by 14k • written 4.4 years ago by ▴ 10
0
votes
2
replies
1.3k
views
how to calculate p-value of Cuffdiff result?
RNA-Seq Cuffdiff fpkm p-value
updated 4.6 years ago by 20 • written 4.6 years ago by ▴ 10
0
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0
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606
views
how to download quality value files for csfasta in NCBI GEO datasets?
csfasta GEO NCBI
4.6 years ago by dahun73 ▴ 10
0
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0
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1.4k
views
eCLIP-seq peak calling using HOMER
RNA-Seq CLIP-Seq HOMER Peak Algorithm
4.7 years ago by dahun73 ▴ 10
0
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0
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907
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Comment: C: Filtering repetitive element during mapping
4.7 years ago by dahun73 ▴ 10
2
votes
2
replies
907
views
Filtering repetitive element during mapping
RNA-Seq alignment mapping
updated 4.7 years ago by 13k • written 4.7 years ago by ▴ 10
0
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0
replies
1.3k
views
Convert BED to BAM files
rna-seq eCLIP CLIP
4.8 years ago by dahun73 ▴ 10
5
votes
1
reply
1.7k
views
Local installation of UCSC Genome Browser
genome ucsc browser
updated 5.0 years ago by 45k • written 5.0 years ago by ▴ 10
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