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Comment: Comment: Pattern match using R Biostrings
2.5 years ago by asumani ▴ 70
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1.5k
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Comment: Comment: Pattern match using R Biostrings
2.5 years ago by asumani ▴ 70
0
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0
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1.5k
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Comment: Comment: Pattern match using R Biostrings
2.5 years ago by asumani ▴ 70
1
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7
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1.5k
views
Pattern match using R Biostrings
biostrings pattern
updated 2.5 years ago by 89k • written 2.5 years ago by ▴ 70
1
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5
replies
1.2k
views
How to filter BLAST database before search?
BLAST Entrez EntrezQuery
updated 2.7 years ago by ★ 29k • written 2.7 years ago by ▴ 70
0
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0
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1.2k
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Comment: Comment: How to filter BLAST database before search?
2.7 years ago by asumani ▴ 70
0
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1
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1.2k
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Comment: Comment: How to filter BLAST database before search?
2.7 years ago by asumani ▴ 70
0
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0
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4.4k
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Comment: Comment: Algorithm to remove batch effects
3.9 years ago by asumani ▴ 70
0
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1
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4.4k
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Comment: Comment: Algorithm to remove batch effects
3.9 years ago by asumani ▴ 70
0
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1
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1.7k
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Comment: Comment: Group Genes by Protein Coding/Non-coding feature
3.9 years ago by asumani ▴ 70
1
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5
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1.7k
views
Group Genes by Protein Coding/Non-coding feature
NON-CODING GENE ID_CONVERSION CODING
updated 3.9 years ago by 150k • written 3.9 years ago by ▴ 70
2
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1
reply
492
views
Compatilibity between human37 and human38 gtf
GRCh37v75
updated 3.9 years ago by 47k • written 3.9 years ago by ▴ 70
0
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0
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2.5k
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Comment: Comment: Duplicated Gene Symbol names after geneID conversion
4.0 years ago by asumani ▴ 70
1
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2
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2.5k
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Duplicated Gene Symbol names after geneID conversion
geneID
updated 4.0 years ago by 150k • written 4.0 years ago by ▴ 70
7
votes
6
replies
1.9k
views
What happens if a UMI fragment has a PCR artefact?
unique moleculer identifier
updated 4.3 years ago by 21k • written 4.3 years ago by ▴ 70
0
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2
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1.9k
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Comment: A: What happens if a UMI fragment has a PCR artefact?
4.3 years ago by asumani ▴ 70
0
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1
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1.5k
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Comment: C: Normalization for subset of data
4.4 years ago by asumani ▴ 70
0
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3
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1.5k
views
Normalization for subset of data
statistics scRNAseq
4.4 years ago by asumani ▴ 70
0
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0
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2.8k
views
Comment: C: How do I convert Hisat2 + stringtie gtf to EVM compatible gff3
4.4 years ago by asumani ▴ 70
0
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1
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1.5k
views
Comment: A: Differential Expression Analysis in Single cell RNAseq
4.4 years ago by asumani ▴ 70
0
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0
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1.5k
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Comment: C: Differential Expression Analysis in Single cell RNAseq
4.4 years ago by asumani ▴ 70
4
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6
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1.5k
views
Differential Expression Analysis in Single cell RNAseq
single-cell RNAseq methods normalization
4.4 years ago by asumani ▴ 70
0
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1
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1.5k
views
Comment: C: Differential Expression Analysis in Single cell RNAseq
4.4 years ago by asumani ▴ 70
4
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6
replies
1.2k
views
How reproducible is the DEG analysis?
DEG Analysis
updated 4.4 years ago by 20 • written 4.6 years ago by ▴ 70
0
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0
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3.2k
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Comment: C: PC1 vs PC2 in separating healthy vs disease
4.5 years ago by asumani ▴ 70
0
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1
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3.2k
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Comment: C: PC1 vs PC2 in separating healthy vs disease
4.5 years ago by asumani ▴ 70
0
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0
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3.2k
views
Comment: C: PC1 vs PC2 in separating healthy vs disease
4.5 years ago by asumani ▴ 70
4
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8
replies
3.2k
views
PC1 vs PC2 in separating healthy vs disease
pca rna-seq
4.5 years ago by asumani ▴ 70
0
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2
replies
3.2k
views
Comment: C: PCA1 vs PCA2 in separating healthy vs disease
4.5 years ago by asumani ▴ 70
0
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1
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1.5k
views
Comment: C: Gene vs Transcript Level DEG Analysis
4.5 years ago by asumani ▴ 70
11
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3
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1.5k
views
Gene vs Transcript Level DEG Analysis
ballgown RNA-Seq
4.5 years ago by asumani ▴ 70
0
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0
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1.2k
views
Comment: C: How reproducible is the DEG analysis?
4.6 years ago by asumani ▴ 70
0
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1
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1.2k
views
Comment: C: How reproducible is the DEG analysis?
4.6 years ago by asumani ▴ 70
0
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0
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1.2k
views
Comment: C: How reproducible is the DEG analysis?
4.6 years ago by asumani ▴ 70
2
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1
reply
936
views
Quality Control After Alignment
quality control RNA-Seq HISAT2 scRNA-Seq
4.6 years ago by asumani ▴ 70
1
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0
replies
936
views
Answer: A: Quality Control After Alignment
4.6 years ago by asumani ▴ 70
0
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0
replies
3.4k
views
Comment: C: How to handle DNA methylation duplication in Bismark?
4.6 years ago by asumani ▴ 70
0
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0
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1.5k
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Comment: C: limma DEG analysis with count matrix as input
4.6 years ago by asumani ▴ 70
0
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2
replies
1.5k
views
limma DEG analysis with count matrix as input
meta-analysis limma microarray
4.6 years ago by asumani ▴ 70
0
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0
replies
666
views
Comment: C: Random 24mers as control data-set
5.0 years ago by asumani ▴ 70
1
vote
2
replies
666
views
Random 24mers as control data-set
rna-seq R
5.0 years ago by asumani ▴ 70
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