Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
4.9k
views
Comment: Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
7 months ago by dario.garvan ▴ 520
0
votes
1
reply
2.1k
views
Comment: Comment: mouse+human cells in 10x scRNA-seq
12 months ago by dario.garvan ▴ 520
0
votes
0
replies
3.5k
views
Comment: Comment: VEP allele frequency from gnomAD genomes
2.8 years ago by dario.garvan ▴ 520
1
vote
1
reply
14k
views
Comment: Comment: Obtaining read group information from the Fastq file
3.6 years ago by dario.garvan ▴ 520
0
votes
0
replies
11k
views
Comment: Comment: How To Split Reads For Different Flowcell Lanes In Fastq Files?
3.6 years ago by dario.garvan ▴ 520
0
votes
0
replies
940
views
Comment: C: Calculate Average Genome Coverage Accurately for hg38 Reference Using Alternate
4.5 years ago by dario.garvan ▴ 520
0
votes
2
replies
940
views
Calculate Average Genome Coverage Accurately for hg38 Reference Using Alternate Contigs and Decoys
alignment summary
4.5 years ago by dario.garvan ▴ 520
0
votes
0
replies
1.1k
views
Comment: C: Extract RNA Support for Somatic SNV Identified using DNA
4.7 years ago by dario.garvan ▴ 520
0
votes
1
reply
1.1k
views
Comment: C: Extract RNA Support for Somatic SNV Identified using DNA
4.7 years ago by dario.garvan ▴ 520
1
vote
4
replies
1.1k
views
Extract RNA Support for Somatic SNV Identified using DNA
SNV DNA and RNA Integration
4.7 years ago by dario.garvan ▴ 520
0
votes
0
replies
1.9k
views
Comment: C: HM450k probes portrayed on chromosomes
updated 5.0 years ago by 44k • written 8.9 years ago by ▴ 520
1
vote
1
reply
6.4k
views
Answer: A: Why are there many reads with green color in IGV of RNA-seq data?
5.5 years ago by dario.garvan ▴ 520
0
votes
0
replies
2.9k
views
Comment: C: FPKM for Normal vs Tumor
updated 5.5 years ago by 44k • written 10.0 years ago by ▴ 520
3
votes
0
replies
5.1k
views
Answer: A: how to deal with batch effect in TCGA RNA-seq dataset
5.8 years ago by dario.garvan ▴ 520
0
votes
0
replies
2.5k
views
Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
7
votes
13
replies
2.5k
views
6 follow
Clumpify Input via Process Substitution
bbmap clumpify
5.8 years ago by dario.garvan ▴ 520
1
vote
1
reply
2.5k
views
Answer: A: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
0
votes
0
replies
2.5k
views
Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
0
votes
1
reply
2.5k
views
Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
0
votes
1
reply
2.5k
views
Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
0
votes
2
replies
1.5k
views
Comment: C: Efficent Estimation of Sequencing Coverage
5.9 years ago by dario.garvan ▴ 520
5
votes
4
replies
1.5k
views
Efficent Estimation of Sequencing Coverage
samtools coverage
updated 5.9 years ago by ★ 5.0k • written 5.9 years ago by ▴ 520
1
vote
1
reply
1.7k
views
Answer: A: Using expression array data to predict ethnicty
6.9 years ago by dario.garvan ▴ 520
0
votes
0
replies
1.2k
views
Comment: C: Retrieval of batch info for GSE46691
6.9 years ago by dario.garvan ▴ 520
1
vote
0
replies
1.2k
views
Answer: A: Retrieval of batch info for GSE46691
6.9 years ago by dario.garvan ▴ 520
0
votes
1
reply
1.7k
views
Comment: C: Using expression array data to predict ethnicty
6.9 years ago by dario.garvan ▴ 520
1
vote
0
replies
12k
views
Comment: C: Analyzing RNA-seq without replicates
6.9 years ago by dario.garvan ▴ 520
0
votes
1
reply
1.9k
views
Answer: A: De novo RNA-seq
6.9 years ago by dario.garvan ▴ 520
0
votes
0
replies
105k
views
Comment: C: Number of mapped reads from BAM file
7.4 years ago by dario.garvan ▴ 520
1
vote
1
reply
3.5k
views
Comment: C: How to identify adapters in FASTQ file?
7.8 years ago by dario.garvan ▴ 520
0
votes
1
reply
4.0k
views
Comment: C: HLA typing WGS data
7.8 years ago by dario.garvan ▴ 520
2
votes
1
reply
4.0k
views
Answer: A: HLA typing WGS data
7.8 years ago by dario.garvan ▴ 520
2
votes
1
reply
1.4k
views
Quantifying HLA Gene Expression
RNA-Seq Mapping
7.8 years ago by dario.garvan ▴ 520
15
votes
16
replies
2.2k
views
Forum: Modernising the FASTQ Format
FASTA Efficiency FASTQ
updated 20 months ago by 44k • written 7.9 years ago by ▴ 520
0
votes
1
reply
2.2k
views
Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
0
votes
1
reply
2.2k
views
Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
0
votes
1
reply
2.2k
views
Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
0
votes
0
replies
15k
views
Comment: C: Anyone Has A Working Example On How To Run BROAD's ABSOLUTE On Exome Sequencing
8.2 years ago by dario.garvan ▴ 520
0
votes
0
replies
15k
views
Comment: C: Anyone Has A Working Example On How To Run BROAD's ABSOLUTE On Exome Sequencing
8.2 years ago by dario.garvan ▴ 520
0
votes
0
replies
11k
views
Comment: C: Count 5'End Mapped To A Specific Genomic Position
8.3 years ago by dario.garvan ▴ 520
0
votes
0
replies
1.8k
views
Answer: A: Suggestions to measure differential expression of two transcripts
8.6 years ago by dario.garvan ▴ 520
0
votes
0
replies
1.9k
views
Answer: A: Survival analysis with three prediction variables
8.6 years ago by dario.garvan ▴ 520
0
votes
1
reply
1.8k
views
Comment: C: Suggestions to measure differential expression of two transcripts
8.6 years ago by dario.garvan ▴ 520
4
votes
1
reply
5.3k
views
Answer: A: Pretty display of values for samples arranged in a 384-well plate (in R).
8.7 years ago by dario.garvan ▴ 520
0
votes
0
replies
3.0k
views
Comment: C: Fix FoxG1 deletion in my son using CRISPR
8.7 years ago by dario.garvan ▴ 520
4
votes
1
reply
4.4k
views
Comment: C: RNA-seq replicates pooled before sequencing. How to proceed with DGE analysis?
8.7 years ago by dario.garvan ▴ 520
0
votes
1
reply
3.1k
views
Comment: C: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.7 years ago by dario.garvan ▴ 520
1
vote
0
replies
1.7k
views
Answer: A: Filtering before multivariate analysis
8.8 years ago by dario.garvan ▴ 520
0
votes
1
reply
3.1k
views
Answer: A: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.8 years ago by dario.garvan ▴ 520
0
votes
0
replies
5.7k
views
Answer: A: would it be a good idea to normalize log2 fold changes with loess?
8.9 years ago by dario.garvan ▴ 520
75 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6