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Comment: Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
7 months ago by dario.garvan ▴ 520
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Comment: Comment: mouse+human cells in 10x scRNA-seq
12 months ago by dario.garvan ▴ 520
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3.5k
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Comment: Comment: VEP allele frequency from gnomAD genomes
2.8 years ago by dario.garvan ▴ 520
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14k
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Comment: Comment: Obtaining read group information from the Fastq file
3.6 years ago by dario.garvan ▴ 520
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11k
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Comment: Comment: How To Split Reads For Different Flowcell Lanes In Fastq Files?
3.6 years ago by dario.garvan ▴ 520
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943
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Comment: C: Calculate Average Genome Coverage Accurately for hg38 Reference Using Alternate
4.5 years ago by dario.garvan ▴ 520
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2
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943
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Calculate Average Genome Coverage Accurately for hg38 Reference Using Alternate Contigs and Decoys
alignment summary
4.5 years ago by dario.garvan ▴ 520
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1.1k
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Comment: C: Extract RNA Support for Somatic SNV Identified using DNA
4.7 years ago by dario.garvan ▴ 520
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1.1k
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Comment: C: Extract RNA Support for Somatic SNV Identified using DNA
4.7 years ago by dario.garvan ▴ 520
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4
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1.1k
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Extract RNA Support for Somatic SNV Identified using DNA
SNV DNA and RNA Integration
4.7 years ago by dario.garvan ▴ 520
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1.9k
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Comment: C: HM450k probes portrayed on chromosomes
updated 5.0 years ago by 44k • written 8.9 years ago by ▴ 520
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Answer: A: Why are there many reads with green color in IGV of RNA-seq data?
5.5 years ago by dario.garvan ▴ 520
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2.9k
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Comment: C: FPKM for Normal vs Tumor
updated 5.5 years ago by 44k • written 10.0 years ago by ▴ 520
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5.1k
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Answer: A: how to deal with batch effect in TCGA RNA-seq dataset
5.8 years ago by dario.garvan ▴ 520
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2.5k
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Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
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13
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2.5k
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6 follow
Clumpify Input via Process Substitution
bbmap clumpify
5.8 years ago by dario.garvan ▴ 520
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2.5k
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Answer: A: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
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2.5k
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Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
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1
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2.5k
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Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
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1
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2.5k
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Comment: C: Clumpify Input via Process Substitution
5.8 years ago by dario.garvan ▴ 520
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2
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1.5k
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Comment: C: Efficent Estimation of Sequencing Coverage
5.9 years ago by dario.garvan ▴ 520
5
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4
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1.5k
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Efficent Estimation of Sequencing Coverage
samtools coverage
updated 5.9 years ago by ★ 5.0k • written 5.9 years ago by ▴ 520
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1
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1.7k
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Answer: A: Using expression array data to predict ethnicty
6.9 years ago by dario.garvan ▴ 520
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1.2k
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Comment: C: Retrieval of batch info for GSE46691
6.9 years ago by dario.garvan ▴ 520
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1.2k
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Answer: A: Retrieval of batch info for GSE46691
6.9 years ago by dario.garvan ▴ 520
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1
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1.7k
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Comment: C: Using expression array data to predict ethnicty
6.9 years ago by dario.garvan ▴ 520
1
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0
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12k
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Comment: C: Analyzing RNA-seq without replicates
6.9 years ago by dario.garvan ▴ 520
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1
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1.9k
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Answer: A: De novo RNA-seq
6.9 years ago by dario.garvan ▴ 520
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0
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105k
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Comment: C: Number of mapped reads from BAM file
7.4 years ago by dario.garvan ▴ 520
1
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1
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3.5k
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Comment: C: How to identify adapters in FASTQ file?
7.8 years ago by dario.garvan ▴ 520
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1
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4.0k
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Comment: C: HLA typing WGS data
7.8 years ago by dario.garvan ▴ 520
2
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1
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4.0k
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Answer: A: HLA typing WGS data
7.8 years ago by dario.garvan ▴ 520
2
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1
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1.4k
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Quantifying HLA Gene Expression
RNA-Seq Mapping
7.8 years ago by dario.garvan ▴ 520
15
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16
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2.2k
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Forum: Modernising the FASTQ Format
FASTA Efficiency FASTQ
updated 20 months ago by 44k • written 7.9 years ago by ▴ 520
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2.2k
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Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
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2.2k
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Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
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1
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2.2k
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Comment: C: Modernising the FASTQ Format
7.9 years ago by dario.garvan ▴ 520
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0
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15k
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Comment: C: Anyone Has A Working Example On How To Run BROAD's ABSOLUTE On Exome Sequencing
8.2 years ago by dario.garvan ▴ 520
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15k
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Comment: C: Anyone Has A Working Example On How To Run BROAD's ABSOLUTE On Exome Sequencing
8.2 years ago by dario.garvan ▴ 520
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0
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11k
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Comment: C: Count 5'End Mapped To A Specific Genomic Position
8.3 years ago by dario.garvan ▴ 520
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0
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1.8k
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Answer: A: Suggestions to measure differential expression of two transcripts
8.6 years ago by dario.garvan ▴ 520
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0
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1.9k
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Answer: A: Survival analysis with three prediction variables
8.6 years ago by dario.garvan ▴ 520
0
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1
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1.8k
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Comment: C: Suggestions to measure differential expression of two transcripts
8.6 years ago by dario.garvan ▴ 520
4
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1
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5.3k
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Answer: A: Pretty display of values for samples arranged in a 384-well plate (in R).
8.7 years ago by dario.garvan ▴ 520
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0
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3.0k
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Comment: C: Fix FoxG1 deletion in my son using CRISPR
8.7 years ago by dario.garvan ▴ 520
4
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1
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4.5k
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Comment: C: RNA-seq replicates pooled before sequencing. How to proceed with DGE analysis?
8.7 years ago by dario.garvan ▴ 520
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1
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3.1k
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Comment: C: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.7 years ago by dario.garvan ▴ 520
1
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0
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1.7k
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Answer: A: Filtering before multivariate analysis
8.8 years ago by dario.garvan ▴ 520
0
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1
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3.1k
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Answer: A: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.8 years ago by dario.garvan ▴ 520
0
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0
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5.7k
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Answer: A: would it be a good idea to normalize log2 fold changes with loess?
8.9 years ago by dario.garvan ▴ 520
75 results • Page 1 of 2
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