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Comment: C: How I can study cross-talk from two different tissue using gene expression profi
4.2 years ago by Shalu Jhanwar ▴ 540
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Answer: A: Retrieve Protein Sequences from Uniprot
4.2 years ago by Shalu Jhanwar ▴ 540
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Answer: A: checking overlap between two genomic coordinates
4.3 years ago by Shalu Jhanwar ▴ 540
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27k
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Answer: A: How to Make Dot Plots of GO Terms?
4.3 years ago by Shalu Jhanwar ▴ 540
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1.6k
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Answer: A: Phred qual error after fastq trimming
4.3 years ago by Shalu Jhanwar ▴ 540
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1.3k
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Answer: A: Extracting rows on basis of specific column values in R
4.3 years ago by Shalu Jhanwar ▴ 540
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Answer: A: Using rsem-calculate-expression and STAR: invalid number of arguments?
4.3 years ago by Shalu Jhanwar ▴ 540
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Answer: A: Gene Ontology Database
4.3 years ago by Shalu Jhanwar ▴ 540
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905
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Answer: A: multi species_gene name to description
4.3 years ago by Shalu Jhanwar ▴ 540
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Answer: A: New to NGS
4.3 years ago by Shalu Jhanwar ▴ 540
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787
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Answer: A: How to correct a wrong protein extraction from FASTA file?
4.3 years ago by Shalu Jhanwar ▴ 540
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920
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Answer: A: Which multiple sequence alignment algorithm should be used for small dataset?
4.3 years ago by Shalu Jhanwar ▴ 540
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855
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Answer: A: Custom reference genome for hybride mouse
4.4 years ago by Shalu Jhanwar ▴ 540
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1.1k
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Answer: A: Question about annotation file
4.4 years ago by Shalu Jhanwar ▴ 540
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160k
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Comment: A: The Biostar Handbook. A bioinformatics e-book for beginners.
4.4 years ago by Shalu Jhanwar ▴ 540
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976
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Comment: C: Monoallelic expression datasets (high-throughput sequencing)
4.4 years ago by Shalu Jhanwar ▴ 540
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976
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Answer: A: Monoallelic expression datasets (high-throughput sequencing)
4.4 years ago by Shalu Jhanwar ▴ 540
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Comment: C: How to put CutAdapt in path for running TrimGalore?
4.4 years ago by Shalu Jhanwar ▴ 540
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2
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3.4k
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Answer: A: How to put CutAdapt in path for running TrimGalore?
4.4 years ago by Shalu Jhanwar ▴ 540
2
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1
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7.4k
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Answer: A: How to add column to table with awk
4.4 years ago by Shalu Jhanwar ▴ 540
2
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2.4k
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Answer: A: Which tool is most popular for GO over-representation analysis?
4.4 years ago by Shalu Jhanwar ▴ 540
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1.5k
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Comment: C: FireBrowse TCGA data files
4.4 years ago by Shalu Jhanwar ▴ 540
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1.5k
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Answer: A: FireBrowse TCGA data files
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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1.5k
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Comment: C: FireBrowse TCGA data files
4.4 years ago by Shalu Jhanwar ▴ 540
2
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1
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1.2k
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Answer: A: Network Analysis of Each Cluster of Protein Interaction Network
4.4 years ago by Shalu Jhanwar ▴ 540
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2
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2.2k
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Answer: A: Download the promoter, enchancer, TSS , 3 prime, exon and intron positions of al
4.4 years ago by Shalu Jhanwar ▴ 540
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4.1k
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Answer: A: Phylogenetic analysis for large size fasta sequences
4.4 years ago by Shalu Jhanwar ▴ 540
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5.6k
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Answer: A: BlastP vs BlastX
4.4 years ago by Shalu Jhanwar ▴ 540
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2.6k
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Answer: A: Understanding the output from HTseq-count
4.4 years ago by Shalu Jhanwar ▴ 540
2
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1
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832
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Answer: A: To get correlation of different ChIP-seq samples
4.4 years ago by Shalu Jhanwar ▴ 540
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2
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3.2k
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Answer: A: featureCounts, GZIP ERROR:-2
4.4 years ago by Shalu Jhanwar ▴ 540
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1.8k
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Answer: A: how Creat un-aligne file with bowtie?
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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3.2k
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Comment: C: Full GTF file vs Subset GTF file
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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1.3k
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Answer: A: DESeq2 for Differential gene expression
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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3.2k
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Answer: A: Full GTF file vs Subset GTF file
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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2.2k
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Answer: A: Software suggestion for RRBS DMR (methylation) analysis?
4.4 years ago by Shalu Jhanwar ▴ 540
4
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6.0k
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Answer: A: Find Orthologs On Biomart
4.4 years ago by Shalu Jhanwar ▴ 540
3
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1.4k
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Answer: A: Whole Genome Sequencing Data Annotation
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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1.2k
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Answer: A: Platanus: command not found
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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2.1k
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Answer: A: Error in reading expression matrix
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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4.4k
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Answer: A: High rate of "Aligned concordantly >1 times:"
4.4 years ago by Shalu Jhanwar ▴ 540
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3.0k
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Comment: A: Is it possible to identify different expressed genes by using TPM?
updated 4.4 years ago by 44k • written 4.4 years ago by ▴ 540
2
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1.1k
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Answer: A: Failed to merge BAM files
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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2.2k
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Answer: A: Converting RPKM into counts
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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4.5k
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Answer: A: Using DESeq2 for time-series analysis
4.4 years ago by Shalu Jhanwar ▴ 540
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2.1k
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Comment: C: Running linux command macs2 in R error
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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2.1k
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Answer: A: Running linux command macs2 in R error
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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1.2k
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Answer: A: Submitting Genemark annotation to Genbank
4.4 years ago by Shalu Jhanwar ▴ 540
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1
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1.7k
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Answer: A: Annotation of non model fish (mahi mahi) genome
4.4 years ago by Shalu Jhanwar ▴ 540
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0
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1.1k
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Comment: A: venn diagram of rna seq and microarray datasets
4.4 years ago by Shalu Jhanwar ▴ 540
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