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0
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3.3k
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Comment: C: Measuring transcriptional noise
updated 5.4 years ago by 45k • written 9.4 years ago by ★ 2.2k
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0
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4.0k
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Comment: C: Mapping RNA-seq against genome
updated 5.5 years ago by 45k • written 9.4 years ago by ★ 2.2k
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0
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43k
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Comment: C: How to know that your RNA-seq is stranded or not?
updated 5.5 years ago by 45k • written 11.2 years ago by ★ 2.2k
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0
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8.9k
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Comment: C: T-test for RNA-seq FPKM values in Excel
updated 5.5 years ago by 45k • written 9.4 years ago by ★ 2.2k
0
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1
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3.2k
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Comment: C: HOMER Bioinformatics manual/website
updated 5.5 years ago by 45k • written 9.4 years ago by ★ 2.2k
14
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4
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1.7k
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Blog: Free for academic use only licenses (If you want to sell your software please just sell your software)
Licensing
updated 2.4 years ago by 45k • written 6.1 years ago by ★ 2.2k
1
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0
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1.7k
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Comment: C: Free for academic use only licenses (If you want to sell your software please ju
6.1 years ago by Michele Busby ★ 2.2k
0
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0
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5.7k
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Comment: C: Detecting highly variable genes within replicates
6.3 years ago by Michele Busby ★ 2.2k
8
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1
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5.7k
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Answer: A: Detecting highly variable genes within replicates
6.3 years ago by Michele Busby ★ 2.2k
2
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0
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18k
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Comment: C: Can We Compare Two Different Rna-Seq Experiments?
updated 6.4 years ago by 45k • written 11.7 years ago by ★ 2.2k
3
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0
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2.3k
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Answer: A: HLA Typing understanding
6.8 years ago by Michele Busby ★ 2.2k
0
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0
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1.9k
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Comment: C: DNA Hybridization Melting Temperature Open Source
6.9 years ago by Michele Busby ★ 2.2k
1
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3
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1.9k
views
DNA Hybridization Melting Temperature Open Source
sequence
updated 6.9 years ago by 166k • written 6.9 years ago by ★ 2.2k
3
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0
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2.4k
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Answer: A: Statistical test for replicates
6.9 years ago by Michele Busby ★ 2.2k
0
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0
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7.9k
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Answer: A: fastq- dump error
7.0 years ago by Michele Busby ★ 2.2k
1
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0
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1.6k
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Answer: A: RSEM build for C. elegans
7.0 years ago by Michele Busby ★ 2.2k
1
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1
reply
1.6k
views
RSEM build for C. elegans
RNA-Seq
updated 7.0 years ago by 35k • written 7.0 years ago by ★ 2.2k
4
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0
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2.2k
views
Answer: A: quantification RNAseq and normalization
7.1 years ago by Michele Busby ★ 2.2k
0
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0
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3.3k
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Answer: A: How to remove the RIN (RNA integrity number) effect for RNA-seq data?
7.1 years ago by Michele Busby ★ 2.2k
4
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0
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3.2k
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Answer: A: Can I add TPM values of Isoforms of the same gene to get total gene expression?
7.4 years ago by Michele Busby ★ 2.2k
2
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1
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1.7k
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Answer: A: Sub-typing patients by a single gene's expression in TCGA dataset.
7.4 years ago by Michele Busby ★ 2.2k
0
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0
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10k
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Comment: C: ChIP seq- input DNA control for normalization
7.5 years ago by Michele Busby ★ 2.2k
0
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0
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10k
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Comment: C: ChIP seq- input DNA control for normalization
7.5 years ago by Michele Busby ★ 2.2k
2
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0
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1.8k
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Job: Bioinformatics Scientist at Gritstone Oncology (Cambridge, MA)
RNA-Seq next-gen-sequencing
updated 2.1 years ago by 45k • written 7.5 years ago by ★ 2.2k
2
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0
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4.1k
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Answer: A: RSEM RNAseq - comparison between samples
7.7 years ago by Michele Busby ★ 2.2k
0
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0
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2.1k
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Answer: A: Are a Large Number of Biological Replicates Ever an Acceptable Replacement for T
7.7 years ago by Michele Busby ★ 2.2k
2
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1
reply
5.9k
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Answer: A: Differential expression for two very different samples
7.9 years ago by Michele Busby ★ 2.2k
1
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0
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8.3k
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Comment: C: Retrieving data from new data portal of tcga
8.0 years ago by Michele Busby ★ 2.2k
0
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0
replies
3.2k
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Comment: C: IP efficiency in Chip-Seq data
8.1 years ago by Michele Busby ★ 2.2k
1
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1
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3.2k
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Answer: A: IP efficiency in Chip-Seq data
8.1 years ago by Michele Busby ★ 2.2k
1
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0
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5.1k
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Comment: C: Small RNA-seq experimental design, which one is better?
8.2 years ago by Michele Busby ★ 2.2k
1
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1
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5.1k
views
Answer: A: Small RNA-seq experimental design, which one is better?
8.2 years ago by Michele Busby ★ 2.2k
0
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2
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3.1k
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Comment: Comment: Research advice needed
8.4 years ago by Michele Busby ★ 2.2k
0
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1
reply
3.1k
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Comment: C: Research advice needed
8.4 years ago by Michele Busby ★ 2.2k
4
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1
reply
3.1k
views
Answer: A: Research advice needed
8.4 years ago by Michele Busby ★ 2.2k
6
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1
reply
11k
views
Answer: A: Chip-Seq merging peak files
8.5 years ago by Michele Busby ★ 2.2k
0
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0
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2.3k
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Comment: C: Should we normalize different numbers of reads?
8.5 years ago by Michele Busby ★ 2.2k
0
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1
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2.3k
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Answer: A: Should we normalize different numbers of reads?
8.5 years ago by Michele Busby ★ 2.2k
1
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0
replies
4.4k
views
Comment: C: RNAseq read depth
8.5 years ago by Michele Busby ★ 2.2k
0
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1
reply
4.4k
views
Answer: A: RNAseq read depth
8.5 years ago by Michele Busby ★ 2.2k
1
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1
reply
6.0k
views
Comment: C: Using rnaseq reference sample across batches
8.5 years ago by Michele Busby ★ 2.2k
3
votes
2
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6.0k
views
Answer: A: Using rnaseq reference sample across batches
8.5 years ago by Michele Busby ★ 2.2k
10
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1
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15k
views
Comment: C: How Many Replicates And Which Statistical Test Can Be Done For Preliminary Analy
updated 8.5 years ago by 102k • written 12.3 years ago by ★ 2.2k
0
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0
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15k
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Comment: C: How Many Replicates And Which Statistical Test Can Be Done For Preliminary Analy
8.5 years ago by Michele Busby ★ 2.2k
0
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1
reply
9.5k
views
Comment: C: Rna Seq Experimental Design For Measuring Differential Gene Expression
8.5 years ago by Michele Busby ★ 2.2k
1
vote
1
reply
2.1k
views
Answer: A: A question about RNASeq experiment design
8.6 years ago by Michele Busby ★ 2.2k
0
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0
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3.9k
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Comment: C: Is okay to apply ANOVA to Log2 transformed data ?
8.6 years ago by Michele Busby ★ 2.2k
0
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0
replies
2.9k
views
Answer: A: non-exonic reads in RNAseq
9.1 years ago by Michele Busby ★ 2.2k
1
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1
reply
3.4k
views
Answer: A: Public paired end chip seq dataset, both ChIP and input?
9.1 years ago by Michele Busby ★ 2.2k
0
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0
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4.2k
views
Comment: C: RNA-seq: how big should be the library?
9.2 years ago by Michele Busby ★ 2.2k
131 results • Page 1 of 3
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