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0
votes
2
replies
955
views
split gtex genotype file by chromosome number
genotype
data
vcf
GTEx
split_by_Chromosome
2.9 years ago by
rheab1230
▴ 140
0
votes
1
reply
19k
views
Comment:
Comment: Easy way to split VCF file by chromosome
updated 22 months ago by
Ram
44k • written 2.9 years ago by
rheab1230
▴ 140
0
votes
0
replies
592
views
GTEx RNA-seq data
tissue
expression
count
gene
specific
GTEx
2.9 years ago by
rheab1230
▴ 140
0
votes
0
replies
666
views
imputed dosage to vcf
vcf
impute
dosage
plink
conversion
2.9 years ago by
rheab1230
▴ 140
0
votes
0
replies
1.8k
views
Comment:
Comment: imputed dosage values for vcf files
updated 21 months ago by
Ram
44k • written 2.9 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.8k
views
Comment:
Comment: imputed dosage values for vcf files
updated 21 months ago by
Ram
44k • written 2.9 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.8k
views
Comment:
Comment: imputed dosage values for vcf files
updated 21 months ago by
Ram
44k • written 2.9 years ago by
rheab1230
▴ 140
0
votes
3
replies
1.8k
views
imputed dosage values for vcf files
vcf
genotype
predixcan
dosage
updated 21 months ago by
Ram
44k • written 3.0 years ago by
rheab1230
▴ 140
0
votes
0
replies
1.7k
views
Comment:
Comment: error while running job in michigan imputation server
3.0 years ago by
rheab1230
▴ 140
0
votes
2
replies
1.7k
views
error while running job in michigan imputation server
vcf
reference-genome
michigan-imputation-server
updated 19 months ago by
Sasha
▴ 850 • written 3.0 years ago by
rheab1230
▴ 140
0
votes
0
replies
631
views
how to get info from GTExsampleattributesDS.txt file
GTEx
expression
Sampleattributes.txt
gene
data
SNP
3.0 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.5k
views
Comment:
Comment: packages installation in linux error
3.1 years ago by
rheab1230
▴ 140
0
votes
3
replies
1.5k
views
packages installation in linux error
conda
linux
sqlite
dbdriver
r
updated 3.1 years ago by
antonioggsousa
3.2k • written 3.1 years ago by
rheab1230
▴ 140
0
votes
0
replies
658
views
Comment:
Comment: DCA-MOL software installation
3.1 years ago by
rheab1230
▴ 140
0
votes
1
reply
658
views
DCA-MOL software installation
installation
visualization
DCA-MOL
3.1 years ago by
rheab1230
▴ 140
0
votes
0
replies
513
views
error while running predictdb tutorial
train
predictdb
model
updated 3.1 years ago by
Ram
44k • written 3.1 years ago by
rheab1230
▴ 140
0
votes
0
replies
1.1k
views
Comment:
Comment: error while annotating vcf file using snpEff
3.1 years ago by
rheab1230
▴ 140
1
vote
2
replies
1.1k
views
error while annotating vcf file using snpEff
geneid
annotation
snpEff
ensembl
3.1 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.3k
views
Comment:
Comment: error while installing peertools
3.1 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.1k
views
DESeq2
RNA-seq
DESEq2
updated 19 months ago by
Ram
44k • written 3.2 years ago by
rheab1230
▴ 140
0
votes
0
replies
1.9k
views
Comment:
Comment: rna-seq data
3.2 years ago by
rheab1230
▴ 140
1
vote
1
reply
1.9k
views
Comment:
Comment: rna-seq data
3.2 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.9k
views
Comment:
Comment: rna-seq data
3.2 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.9k
views
Comment:
Comment: rna-seq data
3.2 years ago by
rheab1230
▴ 140
5
votes
7
replies
1.9k
views
rna-seq data
extract
tissues
certain
samples
3.2 years ago by
rheab1230
▴ 140
0
votes
1
reply
961
views
Comment:
Comment: correlation analysis
3.2 years ago by
rheab1230
▴ 140
1
vote
3
replies
961
views
correlation analysis
correlation
vcf
genes.
updated 3.2 years ago by
Kevin Blighe
88k • written 3.2 years ago by
rheab1230
▴ 140
0
votes
1
reply
666
views
error related to module
conda
python
h5py
module
updated 3.3 years ago by
Ram
44k • written 3.3 years ago by
rheab1230
▴ 140
0
votes
0
replies
502
views
predixcan error
vcf
predixcan
updated 21 months ago by
Ram
44k • written 3.3 years ago by
rheab1230
▴ 140
0
votes
1
reply
979
views
Comment:
Comment: vcf file analysis
3.3 years ago by
rheab1230
▴ 140
0
votes
3
replies
979
views
vcf file analysis
columns
rsid
vcf
position
updated 3.3 years ago by
Ram
44k • written 3.3 years ago by
rheab1230
▴ 140
0
votes
0
replies
728
views
Comment:
Comment: column modifications related to SNP
3.3 years ago by
rheab1230
▴ 140
0
votes
1
reply
968
views
bed to vcf
liftover
vcf
bed
updated 3.3 years ago by
brunobsouzaa
▴ 840 • written 3.3 years ago by
rheab1230
▴ 140
3
votes
2
replies
728
views
column modifications related to SNP
modify
snp
vcf
3.3 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.8k
views
Comment:
Comment: genome browser to check SNP genome build
3.3 years ago by
rheab1230
▴ 140
2
votes
3
replies
1.8k
views
genome browser to check SNP genome build
build
snp
vcf
genome
updated 3.3 years ago by
cmdcolin
★ 4.0k • written 3.3 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.4k
views
Comment:
Comment: Inquiry related to vcf file and formatting
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
1.4k
views
Comment:
Comment: Inquiry related to vcf file and formatting
3.4 years ago by
rheab1230
▴ 140
0
votes
5
replies
1.4k
views
Inquiry related to vcf file and formatting
vcf
bcftools
updated 21 months ago by
Ram
44k • written 3.4 years ago by
rheab1230
▴ 140
0
votes
6
replies
2.0k
views
Allele frequency calculation
AF
VCF
snp
calc
updated 3.4 years ago by
sbstevenlee
▴ 480 • written 3.4 years ago by
rheab1230
▴ 140
0
votes
0
replies
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
2.0k
views
Comment:
Comment: Allele frequency calculation
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
2.0k
views
Comment:
Comment: Allele frequency calculation
3.4 years ago by
rheab1230
▴ 140
1
vote
1
reply
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
0
replies
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
0
replies
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
4.1k
views
Comment:
Comment: plotting AF in vcf files
3.4 years ago by
rheab1230
▴ 140
0
votes
0
replies
3.3k
views
Comment:
Comment: error related to vcfstats
3.4 years ago by
rheab1230
▴ 140
0
votes
1
reply
3.3k
views
Comment:
Comment: error related to vcfstats
3.4 years ago by
rheab1230
▴ 140
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