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402
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Comment: Comment: Select one microarray probe for gene (Affymetrix) - tools 2025?
11 weeks ago by Nona ▴ 90
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1
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402
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Comment: Comment: Select one microarray probe for gene (Affymetrix) - tools 2025?
11 weeks ago by Nona ▴ 90
1
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4
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402
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Select one microarray probe for gene (Affymetrix) - tools 2025?
Probes Microarray
11 weeks ago by Nona ▴ 90
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0
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616
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Comment: Comment: Write maf file (opposite of read.maf)
3 months ago by Nona ▴ 90
2
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3
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616
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Write maf file (opposite of read.maf)
maf maftools r
3 months ago by Nona ▴ 90
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0
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633
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Comment: Comment: MAF tools - changing tumor sample barcode name
3 months ago by Nona ▴ 90
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2
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633
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MAF tools - changing tumor sample barcode name
maf maftools r
updated 3 months ago by 12k • written 3 months ago by ▴ 90
2
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5
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2.1k
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Subset Seurat Object based on metadata
Seurat
updated 5 months ago by ▴ 10 • written 10 months ago by ▴ 90
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0
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578
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Comment: Comment: Wilcox or T-test with percentages in R
5 months ago by Nona ▴ 90
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1
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578
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Comment: Comment: Wilcox or T-test with percentages in R
5 months ago by Nona ▴ 90
2
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4
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578
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Wilcox or T-test with percentages in R
R
updated 5 months ago by ★ 4.0k • written 5 months ago by ▴ 90
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0
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755
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Comment: Comment: Changing label geom_text in ggplot
5 months ago by Nona ▴ 90
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7
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755
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Changing label geom_text in ggplot
ggplot
5 months ago by Nona ▴ 90
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0
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755
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Comment: Comment: Changing label geom_text in ggplot
5 months ago by Nona ▴ 90
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1
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755
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Comment: Comment: Changing label geom_text in ggplot
5 months ago by Nona ▴ 90
0
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0
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882
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Comment: Comment: ggplot with ORR in y axis
5 months ago by Nona ▴ 90
2
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1
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882
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Comment: Comment: ggplot with ORR in y axis
5 months ago by Nona ▴ 90
0
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1
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882
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Comment: Comment: ggplot with ORR in y axis
5 months ago by Nona ▴ 90
5
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6
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882
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ggplot with ORR in y axis
ggplot
5 months ago by Nona ▴ 90
0
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0
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1.3k
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Comment: Comment: Permutations FGSEA
6 months ago by Nona ▴ 90
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0
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892
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
6 months ago by Nona ▴ 90
0
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1
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892
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
6 months ago by Nona ▴ 90
0
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0
replies
1.3k
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Comment: Comment: Permutations FGSEA
6 months ago by Nona ▴ 90
3
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5
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892
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Gene set enrichment analysis gives a lot of "significant pathways"
KEGG GESA Hallmarks
6 months ago by Nona ▴ 90
6
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9
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1.3k
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Permutations FGSEA
fgsea
6 months ago by Nona ▴ 90
0
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1
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1.3k
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Answer: Answer: Permutations FGSEA
6 months ago by Nona ▴ 90
0
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1
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1.3k
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Comment: Comment: Permutations FGSEA
6 months ago by Nona ▴ 90
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0
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591
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Comment: Comment: Appropriate minimum gene set size for gene set enrichment analysis
6 months ago by Nona ▴ 90
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2
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591
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Appropriate minimum gene set size for gene set enrichment analysis
HTSanalyzer gsea FGSEA
6 months ago by Nona ▴ 90
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1
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721
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Comment: Comment: Boxplot with adjustment for variable
6 months ago by Nona ▴ 90
2
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4
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721
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Boxplot with adjustment for variable
R boxplot
updated 6 months ago by 12k • written 6 months ago by ▴ 90
0
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0
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981
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Comment: Comment: Pheatmap cluster by columns not working
6 months ago by Nona ▴ 90
0
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0
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981
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Comment: Comment: Pheatmap cluster by columns not working
6 months ago by Nona ▴ 90
0
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2
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981
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Comment: Comment: Pheatmap cluster by columns not working
6 months ago by Nona ▴ 90
4
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6
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981
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Pheatmap cluster by columns not working
R pheatmap
6 months ago by Nona ▴ 90
0
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0
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601
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Comment: Comment: ESTIMATE -tidyestimate package- tumour purity
7 months ago by Nona ▴ 90
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2
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601
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ESTIMATE -tidyestimate package- tumour purity
ESTIMATE Tumour-purity
7 months ago by Nona ▴ 90
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0
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461
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Comment: Comment: Where can I find mutation status in GEO?
9 months ago by Nona ▴ 90
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2
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461
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Where can I find mutation status in GEO?
GEO
9 months ago by Nona ▴ 90
0
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0
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282
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Cox model HR interpretation with percentage
cox R
9 months ago by Nona ▴ 90
0
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0
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277
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Cell fractions (from single cell) as variable in Cox Survival model
Cox single-cell
updated 10 months ago by 45k • written 10 months ago by ▴ 90
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0
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509
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Comment: Comment: .tar files Microarray
10 months ago by Nona ▴ 90
0
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2
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509
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.tar files Microarray
Microarray
10 months ago by Nona ▴ 90
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0
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2.1k
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Comment: Comment: Subset Seurat Object based on metadata
10 months ago by Nona ▴ 90
3
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2
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659
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Combining microarray, RNA Seq, whole & exome sequencing
Microarray RNA
updated 11 months ago by 21k • written 11 months ago by ▴ 90
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0
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308
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Cox Model with interaction item interpretation
Cox
11 months ago by Nona ▴ 90
0
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0
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267
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Use of annotation of integrated Seurat object in single sample
Seurat
12 months ago by Nona ▴ 90
0
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1
reply
624
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Subsetting and merging back Seurat Object brings different results
Seurat
12 months ago by Nona ▴ 90
0
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0
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624
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Comment: Comment: Subsetting and merging back Seurat Object brings different results
12 months ago by Nona ▴ 90
0
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0
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506
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Seurat object reductions (PCA, UMAP,..) after subsetting data
Seurat
12 months ago by Nona ▴ 90
97 results • Page 1 of 2
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