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562
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How to plot the gap distribution of contigs wrt to reference genome
minia distribution minimap2 fasta plot
3.2 years ago by Ashi ▴ 20
2
votes
1
reply
690
views
How to create a new file containing contigs of a certain length from another contigs file
fasta minia
updated 20 months ago by 44k • written 3.2 years ago by ▴ 20
0
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1
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734
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How to find the co ordinates of long reads (simulated by Badreads) with respect to the reference genome
long-reads reference-genome assembly
updated 7 months ago by 44k • written 3.3 years ago by ▴ 20
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0
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1.0k
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Comment: Comment: Error while installing Minia on Linux
3.4 years ago by Ashi ▴ 20
4
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3
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1.0k
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Error while installing Minia on Linux
minia install error linux
3.4 years ago by Ashi ▴ 20
3
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2
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907
views
How to know the positions of contigs in a reference genome
mapping positions alignment reference genome contigs
updated 3.4 years ago by 147k • written 3.4 years ago by ▴ 20
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0
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24k
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Comment: C: Tool for calculating sequence statistic values (e.g. N50) for multiple bins
3.8 years ago by Ashi ▴ 20
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1
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3.1k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.8 years ago by Ashi ▴ 20
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1
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3.1k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.8 years ago by Ashi ▴ 20
0
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1
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3.1k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
updated 3.8 years ago by 147k • written 3.8 years ago by ▴ 20
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0
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3.1k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.8 years ago by Ashi ▴ 20
0
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1
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3.1k
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Comment: C: How to count frequency of kmers for different values of k from fasta file
3.8 years ago by Ashi ▴ 20
0
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12
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3.1k
views
How to count frequency of kmers for different values of k from fasta file
fasta kmers count frequency genome
updated 3.8 years ago by 147k • written 3.8 years ago by ▴ 20
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0
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1.6k
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Comment: C: How does long reads help in the repeated regions of the genome
4.2 years ago by Ashi ▴ 20
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0
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1.6k
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Comment: C: How does long reads help in the repeated regions of the genome
4.2 years ago by Ashi ▴ 20
6
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4
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1.6k
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How does long reads help in the repeated regions of the genome
Illumina short-reads long-reads ONT
updated 17 months ago by 44k • written 4.2 years ago by ▴ 20
0
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0
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832
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How to find all positions of one particular contig to which the short reads have been mapped?
bwa sam mapping longreads shortreads
4.3 years ago by Ashi ▴ 20
0
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0
replies
681
views
How to check contiguity of reads mapped in BWA
Long-reads contiguity mapping BWA
updated 19 months ago by 44k • written 4.4 years ago by ▴ 20
1
vote
1
reply
1.8k
views
What are best Long read simulator generating Oxford Nanopore Reads
Long-reads Simulator ONT
updated 17 months ago by 44k • written 4.4 years ago by ▴ 20
0
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1
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874
views
Comment: C: How to see set of short reads mapped to a particular long read
4.4 years ago by Ashi ▴ 20
3
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4
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874
views
How to see set of short reads mapped to a particular long read
Mapping BWA
updated 17 months ago by 44k • written 4.4 years ago by ▴ 20
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0
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1.3k
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Comment: C: How to find mapped regions in the reference genome
4.4 years ago by Ashi ▴ 20
0
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1
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1.3k
views
Comment: C: How to find mapped regions in the reference genome
4.4 years ago by Ashi ▴ 20
0
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4
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1.3k
views
How to find mapped regions in the reference genome
alignment sequencing genome LongReads BWA
4.4 years ago by Ashi ▴ 20
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