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How to RMA normalize microarray expression data only without the CEL files?
microarray oligo affy rma
3.9 years ago by Microuser • 0
0
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1
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2.2k
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Comment: A: How to RMA normalize microarray expression data only without the CEL files?
3.9 years ago by Microuser • 0
0
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1
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9.2k
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Comment: C: Which of PCA or Heatmap plots are better to exclude outlier replicates from norm
3.9 years ago by Microuser • 0
2
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4
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1.0k
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Problem with downloading full microarray datasets with getGEO function
GEOquery microarray
updated 3.9 years ago by 88k • written 3.9 years ago by • 0
0
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1
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1.0k
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Comment: C: Problem with downloading full microarray datasets with getGEO function
3.9 years ago by Microuser • 0
7
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5
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9.2k
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Which of PCA or Heatmap plots are better to exclude outlier replicates from normalised microarray or similar datasets?
microarray outlier pca heatmap
updated 3.9 years ago by ★ 28k • written 3.9 years ago by • 0
0
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1
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1.5k
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Error at cemitool function to get expression data/CEMiTool
cemitool
updated 4.2 years ago by ▴ 50 • written 4.3 years ago by • 0
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0
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4.0k
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Comment: C: Convert gene ID to gene name/symbol in gene set file (GMT)
4.3 years ago by Microuser • 0
0
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2
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4.0k
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Comment: C: Convert gene ID to gene name/symbol in gene set file (GMT)
4.3 years ago by Microuser • 0
0
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1
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4.0k
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Comment: C: Convert gene ID to gene name/symbol in gene set file (GMT)
4.3 years ago by Microuser • 0
8
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8
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4.0k
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Convert gene ID to gene name/symbol in gene set file (GMT)
GMT geneset
updated 4.3 years ago by 88k • written 4.3 years ago by • 0
0
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0
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629
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Standard deviation versus rank of the mean plot/microarray quality assessment
arrayQualityMetrics microarray
4.3 years ago by Microuser • 0
1
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1
reply
1.0k
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Finding outlier replicates of PCA plot
microarray pca
updated 4.3 years ago by 13k • written 4.3 years ago by • 0
0
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1
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1.1k
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Problem in RMA normalization (Microarray Affymetrix)
Microarray RMA Affybatch Oligo
updated 4.4 years ago by 20 • written 4.4 years ago by • 0
0
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1
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808
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How to correctly assign the matrix row for DGE analysis?
limma makecontrasts microarray dge matrix
4.4 years ago by Microuser • 0
3
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1
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2.3k
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Cannot read CEL files
microarray cel
updated 4.4 years ago by 88k • written 4.4 years ago by • 0
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