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Answer: Answer: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
9 months ago by Jiyao Wang ▴ 380
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1.0k
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Answer: Answer: Physical Protein size
updated 9 months ago by 147k • written 9 months ago by ▴ 380
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760
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Answer: Answer: Aminoacids range of protein domains in PDB structures
10 months ago by Jiyao Wang ▴ 380
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0
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864
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Answer: Answer: Mapping Mutations, Protein Domains, Exon structure on a Protein Figure/Visualiza
12 months ago by Jiyao Wang ▴ 380
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1.8k
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Comment: Comment: Map genome positions onto protein coordinates?
13 months ago by Jiyao Wang ▴ 380
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2
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1.8k
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Answer: Answer: Map genome positions onto protein coordinates?
13 months ago by Jiyao Wang ▴ 380
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1.4k
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Answer: Answer: Search RCSB with a list of protein names?
14 months ago by Jiyao Wang ▴ 380
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2.5k
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Answer: Answer: How do I install DSSP?
14 months ago by Jiyao Wang ▴ 380
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1
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1.3k
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Answer: Answer: NCBI Gene Table Bulk Download
14 months ago by Jiyao Wang ▴ 380
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0
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891
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Answer: Answer: Batch coloring co-folded proteins and outputting PNG
16 months ago by Jiyao Wang ▴ 380
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0
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3.7k
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Answer: Answer: How Study Aromatic-Aromatic Interactions And Amino-Aromatic Interactions Of Prot
16 months ago by Jiyao Wang ▴ 380
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4.6k
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Answer: Answer: Generate Image Of Pdb File From Script Or Command Line
16 months ago by Jiyao Wang ▴ 380
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986
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Answer: Answer: NCBI refseq ids to uniprot ids
18 months ago by Jiyao Wang ▴ 380
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2.3k
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Answer: Answer: How Does Structure Viewer recognize Second Structure Element?
21 months ago by Jiyao Wang ▴ 380
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7.5k
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Answer: Answer: How To Calculate Rasa Of Proteins By Residue?
21 months ago by Jiyao Wang ▴ 380
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4.1k
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Answer: Answer: 2D structure of a custom protein (not in any databases) from a PDB file.
22 months ago by Jiyao Wang ▴ 380
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639
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Answer: Answer: Tool for helix-helix interaction in protein
2.0 years ago by Jiyao Wang ▴ 380
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2.3k
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Answer: Answer: AlphaFold 2 alternatives
2.0 years ago by Jiyao Wang ▴ 380
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0
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2.7k
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Comment: Comment: Where does BioPython store information related to various chemical molecules?
2.0 years ago by Jiyao Wang ▴ 380
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1
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2.7k
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Answer: Answer: Where does BioPython store information related to various chemical molecules?
2.0 years ago by Jiyao Wang ▴ 380
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0
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576
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Answer: Answer: Can the information regarding atomic bonds be interpreted only from atom lines i
2.0 years ago by Jiyao Wang ▴ 380
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1
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4.6k
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Answer: Answer: Mapping PDB ID + chain ID to UniProt ID
2.1 years ago by Jiyao Wang ▴ 380
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2.4k
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Answer: Answer: evaluating the effect of mutation in binding affinity of two proteins
2.2 years ago by Jiyao Wang ▴ 380
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0
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902
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Answer: Answer: Calculating classical bioinformatics features from protein sequences
2.4 years ago by Jiyao Wang ▴ 380
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2.7k
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Answer: Answer: Generating thumbnail previews automatically from PDB files
2.5 years ago by Jiyao Wang ▴ 380
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2.2k
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Answer: Answer: How to get a pdb of the second chain of a homodimer using VMD?
2.6 years ago by Jiyao Wang ▴ 380
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0
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3.5k
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Answer: Answer: Is there any easy way to get ASA/RSA for the whole PDB?
2.6 years ago by Jiyao Wang ▴ 380
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0
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661
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Answer: Answer: bulk mapping of aa residue to protein structural features
2.6 years ago by Jiyao Wang ▴ 380
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0
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3.0k
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Answer: Answer: What to do with a bunch of AlphaFold2 structures?
2.7 years ago by Jiyao Wang ▴ 380
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0
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3.0k
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Answer: Answer: What to do with a bunch of AlphaFold2 structures?
2.7 years ago by Jiyao Wang ▴ 380
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0
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607
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Answer: Answer: Chimera- How to go about changing the threshold of the EM map?
2.8 years ago by Jiyao Wang ▴ 380
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0
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2.9k
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Answer: Answer: model pdb to secondary structure?
2.9 years ago by Jiyao Wang ▴ 380
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0
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2.9k
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Answer: Answer: model pdb to secondary structure?
2.9 years ago by Jiyao Wang ▴ 380
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0
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825
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Answer: Answer: is there a 3D protein structure format on amino acid level?
3.0 years ago by Jiyao Wang ▴ 380
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0
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2.8k
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Answer: Answer: solvent accebility in PDBID
3.0 years ago by Jiyao Wang ▴ 380
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0
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2.6k
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Answer: Answer: Proteins bound to more than one ligand
3.0 years ago by Jiyao Wang ▴ 380
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1
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1.8k
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Answer: Answer: Is it possible to isolate and merge overlapping hits from a BLAST search Aligned
3.2 years ago by Jiyao Wang ▴ 380
2
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0
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4.1k
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Answer: Answer: Precomputed secondary structure prediction from sequence
3.2 years ago by Jiyao Wang ▴ 380
3
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1
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1.7k
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Answer: Answer: Getting cDNA sequence from NCBI
3.2 years ago by Jiyao Wang ▴ 380
1
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1
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3.0k
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Answer: Answer: What to do with a bunch of AlphaFold2 structures?
3.2 years ago by Jiyao Wang ▴ 380
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0
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893
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Answer: Answer: Search PDB-format files for residue contacts
3.2 years ago by Jiyao Wang ▴ 380
2
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0
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1.9k
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Comment: Comment: How to get the name of a protein by knowing only the RefSeq accession number?
3.4 years ago by Jiyao Wang ▴ 380
1
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1
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1.9k
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Answer: Answer: How to get the name of a protein by knowing only the RefSeq accession number?
3.4 years ago by Jiyao Wang ▴ 380
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0
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1.0k
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Answer: Answer: How to extract amino acids from receptor-ligand complex pdb?
3.4 years ago by Jiyao Wang ▴ 380
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0
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1.4k
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Answer: Answer: Finding Binding Site Residues
3.4 years ago by Jiyao Wang ▴ 380
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1
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937
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Answer: Answer: How to obtain all PDB IDs containing similar binding sites with a specific liga
3.5 years ago by Jiyao Wang ▴ 380
4
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2
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1.2k
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Tool: Alternate the wild type and mutant of SARS-CoV-2 N501Y
SNP
updated 17 months ago by 44k • written 3.9 years ago by ▴ 380
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0
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3.8k
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Answer: A: Drawing Dssp File
4.0 years ago by Jiyao Wang ▴ 380
1
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0
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1.3k
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Answer: A: View SNPs of SARS-Cov-2 structures in iCn3D viewer and Jupyter Notebook
4.0 years ago by Jiyao Wang ▴ 380
2
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1
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1.3k
views
Tool: Alternate wild type and mutant of SNPs in 3D
Jupyter-Notebook iCn3D SNP 3D-viewer
updated 17 months ago by 44k • written 4.3 years ago by ▴ 380
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