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0
votes
1
reply
608
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Comment:
Comment: isoformSwithAnalyzeR importRdata error
10 months ago by
bsmith030465
▴ 240
0
votes
4
replies
608
views
isoformSwithAnalyzeR importRdata error
tximport
h5
isoformSwitchAnalyzeR
kallisto
updated 10 months ago by
i.sudbery
20k • written 10 months ago by
bsmith030465
▴ 240
1
vote
2
replies
3.5k
views
SnpSift: Annotate vcf file using GNOMAD
GNOMAD
SnpEff
SnpSift
updated 18 months ago by
Ram
44k • written 3.6 years ago by
bsmith030465
▴ 240
6
votes
3
replies
2.9k
views
Visualize pileup data
pileup
gfp
updated 3.0 years ago by
atorreso
▴ 130 • written 4.0 years ago by
bsmith030465
▴ 240
0
votes
0
replies
1.8k
views
Comment:
Comment: Seurat - setting random seed for FindNeighbors, FindClusters
3.5 years ago by
bsmith030465
▴ 240
0
votes
1
reply
1.8k
views
Seurat - setting random seed for FindNeighbors, FindClusters
seurat
clustree
3.5 years ago by
bsmith030465
▴ 240
1
vote
1
reply
1.6k
views
Annotate vcf with AF, gene symbol, functional information
vcf
gnomad
snpeff
dbsnp
updated 3.6 years ago by
brunobsouzaa
▴ 830 • written 3.6 years ago by
bsmith030465
▴ 240
0
votes
0
replies
1.6k
views
Comment:
C: scRNA: subset a small number of fastq reads
4.0 years ago by
bsmith030465
▴ 240
0
votes
1
reply
1.6k
views
Comment:
C: scRNA: subset a small number of fastq reads
4.0 years ago by
bsmith030465
▴ 240
0
votes
5
replies
1.6k
views
scRNA: subset a small number of fastq reads
scrna
fastq
cellranger
10x
4.0 years ago by
bsmith030465
▴ 240
5
votes
7
replies
52k
views
PLINK: merge .bed files
plink
updated 23 months ago by
Ram
44k • written 9.4 years ago by
bsmith030465
▴ 240
0
votes
1
reply
1.5k
views
Comment:
C: Visualizing gene variants (gviz)
4.2 years ago by
bsmith030465
▴ 240
0
votes
3
replies
1.5k
views
Visualizing gene variants (gviz)
gviz
SNP
4.2 years ago by
bsmith030465
▴ 240
3
votes
4
replies
2.0k
views
Cellranger: BCR analysis
cellranger
scrna
bcr
updated 4.2 years ago by
tiago211287
★ 1.5k • written 4.2 years ago by
bsmith030465
▴ 240
8
votes
5
replies
5.0k
views
gnomAD: query utilitites
gnomAD
updated 4.3 years ago by
r-ninja
▴ 20 • written 5.6 years ago by
bsmith030465
▴ 240
3
votes
3
replies
1.3k
views
Split Fastq files
fastq
illumina
5.0 years ago by
bsmith030465
▴ 240
0
votes
1
reply
52k
views
Comment:
C: PLINK: merge .bed files
updated 5.0 years ago by
Ram
44k • written 9.4 years ago by
bsmith030465
▴ 240
0
votes
1
reply
1.9k
views
Comment:
C: scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
5.2 years ago by
bsmith030465
▴ 240
2
votes
5
replies
1.9k
views
scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
scRNA-seq
RNA-Seq
kallisto
bioproject
fastq-dump
5.2 years ago by
bsmith030465
▴ 240
0
votes
1
reply
1.9k
views
Comment:
C: scRNA-seq: Kallisto processing of bioproject data
5.2 years ago by
bsmith030465
▴ 240
0
votes
0
replies
1.1k
views
Comment:
C: PLINK : Error: --tdt requires a case/control phenotype.
5.3 years ago by
bsmith030465
▴ 240
3
votes
2
replies
1.1k
views
PLINK : Error: --tdt requires a case/control phenotype.
PLINK
updated 5.3 years ago by
chrchang523
11k • written 5.3 years ago by
bsmith030465
▴ 240
0
votes
1
reply
3.3k
views
PLINK - error in --make-bed
plink
updated 5.4 years ago by
chrchang523
11k • written 5.4 years ago by
bsmith030465
▴ 240
0
votes
0
replies
6.8k
views
Comment:
C: PLINK: filter for indels
5.5 years ago by
bsmith030465
▴ 240
3
votes
7
replies
6.8k
views
PLINK: filter for indels
plink
updated 5.5 years ago by
zx8754
12k • written 5.5 years ago by
bsmith030465
▴ 240
0
votes
1
reply
6.8k
views
Comment:
C: PLINK: filter for indels
5.5 years ago by
bsmith030465
▴ 240
0
votes
1
reply
6.8k
views
Comment:
C: PLINK: filter for indels
5.5 years ago by
bsmith030465
▴ 240
14
votes
1
reply
9.7k
views
PLINK: Error: Invalid chromosome code 'chr11_KI0721v1_random'
PLINK
VCF
updated 5.7 years ago by
chrchang523
11k • written 5.7 years ago by
bsmith030465
▴ 240
5
votes
5
replies
7.6k
views
PLINK: Change affection status
plink
updated 23 months ago by
Ram
44k • written 9.4 years ago by
bsmith030465
▴ 240
0
votes
0
replies
6.9k
views
Comment:
C: samtools fastq compression
6.1 years ago by
bsmith030465
▴ 240
2
votes
3
replies
6.9k
views
samtools fastq compression
samtools
fastq
cram
updated 6.1 years ago by
Nitin Narwade
★ 1.6k • written 6.1 years ago by
bsmith030465
▴ 240
0
votes
1
reply
3.8k
views
Comment:
C: bcftools: DP filter based on chromosome and sex
6.2 years ago by
bsmith030465
▴ 240
1
vote
3
replies
3.8k
views
bcftools: DP filter based on chromosome and sex
bcftools
wgs
samtools
vcftools
pyvcf
updated 6.2 years ago by
Pierre Lindenbaum
164k • written 6.2 years ago by
bsmith030465
▴ 240
0
votes
1
reply
4.3k
views
Comment:
C: bcftools filtering error
6.3 years ago by
bsmith030465
▴ 240
0
votes
1
reply
4.3k
views
Comment:
C: bcftools filtering error
6.3 years ago by
bsmith030465
▴ 240
1
vote
7
replies
4.3k
views
bcftools filtering error
next-gen
samtools
bcftools
6.3 years ago by
bsmith030465
▴ 240
3
votes
4
replies
11k
views
PLINK format to EIGENSTRAT format
plink
eigenstrat
updated 2.9 years ago by
Ram
44k • written 10.2 years ago by
bsmith030465
▴ 240
2
votes
4
replies
7.2k
views
plink: vcf to ped
sequencing
snp
PLINK
updated 6.6 years ago by
chrchang523
11k • written 6.6 years ago by
bsmith030465
▴ 240
1
vote
0
replies
1.1k
views
Rsamtools: error with quickBamFlagSummary
Rsamtools
RNA-Seq
7.0 years ago by
bsmith030465
▴ 240
0
votes
0
replies
4.1k
views
Comment:
C: Adjust for covariates
7.0 years ago by
bsmith030465
▴ 240
0
votes
0
replies
4.1k
views
Comment:
C: Adjust for covariates
7.0 years ago by
bsmith030465
▴ 240
3
votes
5
replies
4.1k
views
Adjust for covariates
gene expression
7.0 years ago by
bsmith030465
▴ 240
0
votes
0
replies
7.6k
views
Comment:
C: error on installing samtools on linux cluster
7.6 years ago by
bsmith030465
▴ 240
0
votes
0
replies
7.6k
views
Answer:
A: error on installing samtools on linux cluster
7.6 years ago by
bsmith030465
▴ 240
4
votes
7
replies
7.6k
views
error on installing samtools on linux cluster
samtools
7.6 years ago by
bsmith030465
▴ 240
1
vote
1
reply
5.0k
views
Gviz data track - how to color points, add horizontal line?
Gviz
updated 8.3 years ago by
WouterDeCoster
47k • written 8.3 years ago by
bsmith030465
▴ 240
2
votes
1
reply
4.3k
views
Homo.sapiens - hg38 build?
Homo.sapiens
OrganismDbi
updated 8.3 years ago by
WouterDeCoster
47k • written 8.3 years ago by
bsmith030465
▴ 240
0
votes
0
replies
2.6k
views
Comment:
C: Gviz - creating geneModel object
8.3 years ago by
bsmith030465
▴ 240
0
votes
2
replies
2.6k
views
Gviz - creating geneModel object
Gviz
8.3 years ago by
bsmith030465
▴ 240
0
votes
1
reply
17k
views
Answer:
A: GRanges intersect operation
8.4 years ago by
bsmith030465
▴ 240
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