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0
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814
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Comment: Comment: isoformSwithAnalyzeR importRdata error
15 months ago by bsmith030465 ▴ 240
0
votes
4
replies
814
views
isoformSwithAnalyzeR importRdata error
tximport h5 isoformSwitchAnalyzeR kallisto
updated 14 months ago by 21k • written 15 months ago by ▴ 240
1
vote
2
replies
4.0k
views
SnpSift: Annotate vcf file using GNOMAD
GNOMAD SnpEff SnpSift
updated 23 months ago by 45k • written 4.0 years ago by ▴ 240
7
votes
3
replies
3.2k
views
Visualize pileup data
pileup gfp
updated 3.4 years ago by ▴ 130 • written 4.4 years ago by ▴ 240
0
votes
0
replies
2.0k
views
Comment: Comment: Seurat - setting random seed for FindNeighbors, FindClusters
3.9 years ago by bsmith030465 ▴ 240
0
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1
reply
2.0k
views
Seurat - setting random seed for FindNeighbors, FindClusters
seurat clustree
3.9 years ago by bsmith030465 ▴ 240
1
vote
1
reply
1.7k
views
Annotate vcf with AF, gene symbol, functional information
vcf gnomad snpeff dbsnp
updated 4.0 years ago by ▴ 840 • written 4.0 years ago by ▴ 240
0
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0
replies
1.7k
views
Comment: C: scRNA: subset a small number of fastq reads
4.4 years ago by bsmith030465 ▴ 240
0
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1
reply
1.7k
views
Comment: C: scRNA: subset a small number of fastq reads
4.4 years ago by bsmith030465 ▴ 240
0
votes
5
replies
1.7k
views
scRNA: subset a small number of fastq reads
scrna fastq cellranger 10x
4.4 years ago by bsmith030465 ▴ 240
5
votes
7
replies
55k
views
PLINK: merge .bed files
plink
updated 2.3 years ago by 45k • written 9.8 years ago by ▴ 240
0
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1
reply
1.7k
views
Comment: C: Visualizing gene variants (gviz)
4.5 years ago by bsmith030465 ▴ 240
0
votes
3
replies
1.7k
views
Visualizing gene variants (gviz)
gviz SNP
4.5 years ago by bsmith030465 ▴ 240
3
votes
4
replies
2.2k
views
Cellranger: BCR analysis
cellranger scrna bcr
updated 4.6 years ago by ★ 1.5k • written 4.6 years ago by ▴ 240
8
votes
5
replies
5.5k
views
gnomAD: query utilitites
gnomAD
updated 4.7 years ago by ▴ 20 • written 6.0 years ago by ▴ 240
3
votes
3
replies
1.4k
views
Split Fastq files
fastq illumina
5.4 years ago by bsmith030465 ▴ 240
0
votes
1
reply
55k
views
Comment: C: PLINK: merge .bed files
updated 5.4 years ago by 45k • written 9.8 years ago by ▴ 240
0
votes
1
reply
2.1k
views
Comment: C: scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
5.5 years ago by bsmith030465 ▴ 240
2
votes
5
replies
2.1k
views
scRNA-seq: Kallisto processing of bioproject data (fastq-dump)
scRNA-seq RNA-Seq kallisto bioproject fastq-dump
5.6 years ago by bsmith030465 ▴ 240
0
votes
1
reply
2.1k
views
Comment: C: scRNA-seq: Kallisto processing of bioproject data
5.6 years ago by bsmith030465 ▴ 240
0
votes
0
replies
1.2k
views
Comment: C: PLINK : Error: --tdt requires a case/control phenotype.
5.6 years ago by bsmith030465 ▴ 240
3
votes
2
replies
1.2k
views
PLINK : Error: --tdt requires a case/control phenotype.
PLINK
updated 5.6 years ago by 11k • written 5.6 years ago by ▴ 240
0
votes
1
reply
3.5k
views
PLINK - error in --make-bed
plink
updated 5.8 years ago by 11k • written 5.8 years ago by ▴ 240
0
votes
0
replies
7.3k
views
Comment: C: PLINK: filter for indels
5.9 years ago by bsmith030465 ▴ 240
3
votes
7
replies
7.3k
views
PLINK: filter for indels
plink
updated 5.9 years ago by 12k • written 5.9 years ago by ▴ 240
0
votes
1
reply
7.3k
views
Comment: C: PLINK: filter for indels
5.9 years ago by bsmith030465 ▴ 240
0
votes
1
reply
7.3k
views
Comment: C: PLINK: filter for indels
5.9 years ago by bsmith030465 ▴ 240
14
votes
1
reply
10k
views
PLINK: Error: Invalid chromosome code 'chr11_KI0721v1_random'
PLINK VCF
updated 6.1 years ago by 11k • written 6.1 years ago by ▴ 240
5
votes
5
replies
7.8k
views
PLINK: Change affection status
plink
updated 2.3 years ago by 45k • written 9.8 years ago by ▴ 240
0
votes
0
replies
7.3k
views
Comment: C: samtools fastq compression
6.5 years ago by bsmith030465 ▴ 240
2
votes
3
replies
7.3k
views
samtools fastq compression
samtools fastq cram
updated 6.5 years ago by ★ 1.6k • written 6.5 years ago by ▴ 240
0
votes
1
reply
3.9k
views
Comment: C: bcftools: DP filter based on chromosome and sex
6.6 years ago by bsmith030465 ▴ 240
1
vote
3
replies
3.9k
views
bcftools: DP filter based on chromosome and sex
bcftools wgs samtools vcftools pyvcf
updated 6.6 years ago by 165k • written 6.6 years ago by ▴ 240
0
votes
1
reply
4.6k
views
Comment: C: bcftools filtering error
6.6 years ago by bsmith030465 ▴ 240
0
votes
1
reply
4.6k
views
Comment: C: bcftools filtering error
6.6 years ago by bsmith030465 ▴ 240
1
vote
7
replies
4.6k
views
bcftools filtering error
next-gen samtools bcftools
6.6 years ago by bsmith030465 ▴ 240
3
votes
4
replies
11k
views
PLINK format to EIGENSTRAT format
plink eigenstrat
updated 3.2 years ago by 45k • written 10.5 years ago by ▴ 240
2
votes
4
replies
7.4k
views
plink: vcf to ped
sequencing snp PLINK
updated 7.0 years ago by 11k • written 7.0 years ago by ▴ 240
1
vote
0
replies
1.2k
views
Rsamtools: error with quickBamFlagSummary
Rsamtools RNA-Seq
7.3 years ago by bsmith030465 ▴ 240
0
votes
0
replies
4.3k
views
Comment: C: Adjust for covariates
7.3 years ago by bsmith030465 ▴ 240
0
votes
0
replies
4.3k
views
Comment: C: Adjust for covariates
7.3 years ago by bsmith030465 ▴ 240
3
votes
5
replies
4.3k
views
Adjust for covariates
gene expression
7.3 years ago by bsmith030465 ▴ 240
0
votes
0
replies
7.9k
views
Comment: C: error on installing samtools on linux cluster
8.0 years ago by bsmith030465 ▴ 240
4
votes
7
replies
7.9k
views
error on installing samtools on linux cluster
samtools
8.0 years ago by bsmith030465 ▴ 240
0
votes
0
replies
7.9k
views
Answer: A: error on installing samtools on linux cluster
8.0 years ago by bsmith030465 ▴ 240
1
vote
1
reply
5.1k
views
Gviz data track - how to color points, add horizontal line?
Gviz
updated 8.7 years ago by 47k • written 8.7 years ago by ▴ 240
2
votes
1
reply
4.4k
views
Homo.sapiens - hg38 build?
Homo.sapiens OrganismDbi
updated 8.7 years ago by 47k • written 8.7 years ago by ▴ 240
0
votes
0
replies
2.7k
views
Comment: C: Gviz - creating geneModel object
8.7 years ago by bsmith030465 ▴ 240
0
votes
2
replies
2.7k
views
Gviz - creating geneModel object
Gviz
8.7 years ago by bsmith030465 ▴ 240
0
votes
1
reply
17k
views
Answer: A: GRanges intersect operation
8.7 years ago by bsmith030465 ▴ 240
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