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Comment: Comment: Sub-sampling a BAM to a fixed number of reads
18 months ago by matt81rd ▴ 10
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2.4k
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Comment: Comment: Sub-sampling a BAM to a fixed number of reads
18 months ago by matt81rd ▴ 10
3
votes
4
replies
2.4k
views
Sub-sampling a BAM to a fixed number of reads
samtools BAM
updated 17 months ago by 44k • written 18 months ago by ▴ 10
0
votes
1
reply
576
views
Creating contaminated synthetic reads
Contaminated synthetic reads
updated 19 months ago by ★ 28k • written 19 months ago by ▴ 10
1
vote
1
reply
591
views
Queuing jobs for a synthetic read generator python script
RQ Celery Multiprocessing. APScheduler Python
updated 19 months ago by 102k • written 19 months ago by ▴ 10
0
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2
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660
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removing a word from a .vcf
vcf
updated 22 months ago by 147k • written 22 months ago by ▴ 10
0
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1
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858
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Comment: Comment: Deleting certain rows of a dataFrame using regular expression and pandas
2.0 years ago by matt81rd ▴ 10
4
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3
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858
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Deleting certain rows of a dataFrame using regular expression and pandas
python pandas Regex
updated 2.0 years ago by 6.2k • written 2.0 years ago by ▴ 10
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0
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350
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Understanding VCF files when trying to implement specific variant is synthetic DNA
Synthetic TB Antisense VCF
2.0 years ago by matt81rd ▴ 10
7
votes
4
replies
881
views
Generating synthetic TB reads
Synthetic TB Sequences Genomic
updated 2.1 years ago by 147k • written 2.1 years ago by ▴ 10
1
vote
3
replies
767
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using a loop to extract data from a text file and outputting it as a new file
sed grep awk
updated 2.3 years ago by 21k • written 2.3 years ago by ▴ 10
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0
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923
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Comment: Comment: Bash loop one liner
2.7 years ago by matt81rd ▴ 10
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1
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923
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Comment: Comment: Bash loop one liner
2.7 years ago by matt81rd ▴ 10
1
vote
5
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923
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Bash loop one liner
liner loop centrifuge bash
updated 2.7 years ago by 6.2k • written 2.7 years ago by ▴ 10
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0
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842
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Comment: Comment: Calculating Genome size
2.8 years ago by matt81rd ▴ 10
2
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2
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842
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Calculating Genome size
metagenomics Genome Long-read Nanopore
updated 20 months ago by 44k • written 2.8 years ago by ▴ 10
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2.1k
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Comment: Comment: Using Nanoplot to asses quality of ONT data
2.9 years ago by matt81rd ▴ 10
1
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3
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2.1k
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Using Nanoplot to asses quality of ONT data
ONT Long-read-sequencing NanoPlot
updated 7 months ago by 44k • written 2.9 years ago by ▴ 10
0
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2
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902
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Modyfing a Genbank file
python genbank
updated 4.3 years ago by 13k • written 4.3 years ago by ▴ 10
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