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GWAS() function error rrBLUP package for GWAS
R Rstudio rrBLUP GWAS
updated 5 weeks ago by 44k • written 5 weeks ago by ▴ 30
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1
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417
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Answer: Answer: Somatic Variant Calling from Nanopore Data
3 months ago by giulia.trauzzi ▴ 30
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0
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501
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Comment: Comment: AWK for replacing the content of a column in a csv file with the content of anot
3 months ago by giulia.trauzzi ▴ 30
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0
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501
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Comment: Comment: AWK for replacing the content of a column in a csv file with the content of anot
3 months ago by giulia.trauzzi ▴ 30
2
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4
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501
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AWK for replacing the content of a column in a csv file with the content of another column from another csv WITHOUT USING THE COLUMN NUMBER
bash awk csv
updated 3 months ago by 147k • written 3 months ago by ▴ 30
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
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0
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
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0
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
14
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15
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1.0k
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How to give 2 input files (one from the process before and one from 3 processes before) in nextflow pipeline?
nextflow nf-core processes channels
updated 3 months ago by 7.0k • written 3 months ago by ▴ 30
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2
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
0
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1
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1.0k
views
Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
1
vote
1
reply
1.0k
views
Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by giulia.trauzzi ▴ 30
0
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0
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1.1k
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Comment: Comment: bcl-convert cannot create output directory structure at the path specified
3 months ago by giulia.trauzzi ▴ 30
2
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10
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1.1k
views
bcl-convert cannot create output directory structure at the path specified
illumina reads bcl-convert index demultiplexing
3 months ago by giulia.trauzzi ▴ 30
0
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1
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1.1k
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Comment: Comment: bcl-convert cannot create output directory structure at the path specified
5 months ago by giulia.trauzzi ▴ 30
0
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1
reply
1.1k
views
Comment: Comment: bcl-convert cannot create output directory structure at the path specified
5 months ago by giulia.trauzzi ▴ 30
0
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1
reply
1.1k
views
Comment: Comment: bcl-convert cannot create output directory structure at the path specified
5 months ago by giulia.trauzzi ▴ 30
0
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3
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2.1k
views
Running STRUCTURE from command line
STRUCTURE
updated 6 months ago by 44k • written 3.5 years ago by ▴ 30
0
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2
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1.3k
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Comment: Comment: Porechop output?
8 months ago by giulia.trauzzi ▴ 30
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0
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1.3k
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Comment: Comment: Porechop output?
8 months ago by giulia.trauzzi ▴ 30
5
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9
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1.3k
views
Porechop output?
porechop Nanopore
updated 8 months ago by 147k • written 8 months ago by ▴ 30
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1
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1.3k
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Comment: Comment: Porechop output?
8 months ago by giulia.trauzzi ▴ 30
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0
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63k
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Comment: Comment: Subsampling Bam File With Samtools
10 months ago by giulia.trauzzi ▴ 30
0
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1
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63k
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Comment: Comment: Subsampling Bam File With Samtools
10 months ago by giulia.trauzzi ▴ 30
0
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0
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1.4k
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Comment: Comment: Ipyrad de novo for variant calling
10 months ago by giulia.trauzzi ▴ 30
0
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0
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892
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Comment: Comment: Run metrics of Oxford Nanopore reads and visualisation of alignment
10 months ago by giulia.trauzzi ▴ 30
2
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2
replies
892
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Run metrics of Oxford Nanopore reads and visualisation of alignment
Nanopore alignment sequencing
10 months ago by giulia.trauzzi ▴ 30
1
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7
replies
5.2k
views
Plink1.9 error -chr not recognised
unix plink
updated 2.0 years ago by • 0 • written 3.5 years ago by ▴ 30
0
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3
replies
1.4k
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Ipyrad de novo for variant calling
snps
10 months ago by giulia.trauzzi ▴ 30
0
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1
reply
5.2k
views
Comment: Comment: Plink1.9 error -chr not recognised
3.0 years ago by giulia.trauzzi ▴ 30
0
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1
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2.3k
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Comment: Comment: Tajima'D and low-density SNP data
3.2 years ago by giulia.trauzzi ▴ 30
1
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0
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702
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Why does STRUCTURE v2.3.4 (command line) does not work?
STRUCTURE SNPs bash
3.3 years ago by giulia.trauzzi ▴ 30
0
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4
replies
1.5k
views
Genepop for LD testing SNPs dataset
linkage genepop SNPs
updated 3.5 years ago by 11k • written 3.5 years ago by ▴ 30
0
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2
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1.5k
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Comment: Comment: Genepop for LD testing SNPs dataset
3.5 years ago by giulia.trauzzi ▴ 30
0
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1
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5.2k
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Comment: Comment: Plink1.9 error -chr not recognised
3.5 years ago by giulia.trauzzi ▴ 30
0
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1
reply
8.8k
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Comment: C: Extremely low mapping rates with bowtie2
3.7 years ago by giulia.trauzzi ▴ 30
0
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0
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662
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How many GBS derived reads pass filters after demultiplexing, adapter removal, trimming and filtering?
GBS SNP Stacks Cutadapt
3.7 years ago by giulia.trauzzi ▴ 30
0
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0
replies
684
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Can I use FLEXBAR to detect and remove barcodes out of my short reads without demultiplexing ?
short reads Illumina barcodes removal FLEXBAR
3.7 years ago by giulia.trauzzi ▴ 30
0
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1
reply
915
views
Trimming Illumina Seq with TRIMMOMATIC
trimmomatic GBS Illumina
3.7 years ago by giulia.trauzzi ▴ 30
0
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0
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1.3k
views
Comment: C: Merging .fq files per sample using a big loop - BASH?
3.8 years ago by giulia.trauzzi ▴ 30
3
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8
replies
1.3k
views
Merging .fq files per sample using a big loop - BASH?
fastq bash genomics
updated 20 months ago by 44k • written 3.8 years ago by ▴ 30
1
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2
replies
685
views
Mean sample depth?
depth SNP
3.8 years ago by giulia.trauzzi ▴ 30
0
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0
replies
1.2k
views
Pairwise Fst values derived from different algorithms?
Fst pairwise Fst population genetics statistics
3.8 years ago by giulia.trauzzi ▴ 30
0
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0
replies
991
views
csv file format conversion to arp bash command line
bash population-genetics
updated 20 months ago by 44k • written 4.0 years ago by ▴ 30
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