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3
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3
replies
4.7k
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Answer: A: I'M Looking For A Bioinformatics Problem Which Could Benefit From A New Or Impro
updated 4.6 years ago by 45k • written 11.8 years ago by ▴ 280
0
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0
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4.7k
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Comment: C: I'M Looking For A Bioinformatics Problem Which Could Benefit From A New Or Impro
updated 4.6 years ago by 45k • written 10.9 years ago by ▴ 280
0
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0
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1.1k
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How do I specify a background gene list on reactome?
gene
5.9 years ago by spacemorrissey ▴ 280
0
votes
3
replies
1.7k
views
How do I count the number of cell types in which a given gene is expressed?
RNA-Seq
updated 6.7 years ago by 20 • written 8.5 years ago by ▴ 280
1
vote
1
reply
2.4k
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Answer: A: What is the reasonable proportion of zero counts in single-cell RNA-Seq data
6.8 years ago by spacemorrissey ▴ 280
4
votes
0
replies
17k
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Answer: A: What is the "sliding window" in a bio statistical analysis, e.g. in a genome seq
6.8 years ago by spacemorrissey ▴ 280
3
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1
reply
5.1k
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Answer: A: How can I look at find 'open chromatin' from ATAC-seq data using MACS2
6.8 years ago by spacemorrissey ▴ 280
0
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0
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1.4k
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Comment: C: Analyzing CRISPR and RNAi genome wide screens
6.8 years ago by spacemorrissey ▴ 280
0
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1
reply
1.4k
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Analyzing CRISPR and RNAi genome wide screens
CRISPR RNAi meta analysis
6.8 years ago by spacemorrissey ▴ 280
3
votes
2
replies
2.8k
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Metabolomics Analysis - missing value imputation
metabolomics
updated 13 months ago by ▴ 30 • written 7.0 years ago by ▴ 280
0
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0
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1.5k
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Comment: C: how many columns does F-seq need in the bed file
7.8 years ago by spacemorrissey ▴ 280
0
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1
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1.5k
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Answer: A: how many columns does F-seq need in the bed file
7.8 years ago by spacemorrissey ▴ 280
0
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1
reply
3.2k
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Comment: C: How to report differentially expressed transcription factors in scatter plot
8.4 years ago by spacemorrissey ▴ 280
1
vote
1
reply
3.2k
views
Answer: A: How to report differentially expressed transcription factors in scatter plot
8.4 years ago by spacemorrissey ▴ 280
0
votes
1
reply
1.8k
views
Looking for a Transcriptome meta-analysis algorithm
RNA-Seq
8.4 years ago by spacemorrissey ▴ 280
1
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0
replies
5.4k
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Comment: C: Why chip-seq is strand specific?
8.4 years ago by spacemorrissey ▴ 280
1
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1
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3.0k
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Answer: A: Gene regulatory network visualization and annotation
8.4 years ago by spacemorrissey ▴ 280
4
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1
reply
5.4k
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Answer: A: Why chip-seq is strand specific?
8.4 years ago by spacemorrissey ▴ 280
1
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0
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2.1k
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Comment: C: How to deal with "one probe-multi transcripts" problem?
8.4 years ago by spacemorrissey ▴ 280
0
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1
reply
1.7k
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Comment: C: How do I count the number of cell types in which a given gene is expressed?
8.5 years ago by spacemorrissey ▴ 280
0
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0
replies
1.4k
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Answer: A: How can you explain a high signal on a locus, while it's proven it can't be that
8.5 years ago by spacemorrissey ▴ 280
0
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0
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7.3k
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Answer: A: peaks overlap: ATAC & CHIP seq
8.5 years ago by spacemorrissey ▴ 280
0
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1
reply
2.1k
views
Answer: A: How to deal with "one probe-multi transcripts" problem?
8.5 years ago by spacemorrissey ▴ 280
0
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1
reply
8.8k
views
Answer: Answer: Top MACS peaks from ChIP-seq look identical to input
updated 2.8 years ago by 45k • written 10.0 years ago by ▴ 280
0
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0
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2.8k
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Comment: C: What Is The Best Way To Get Data Back Off Of Galaxy?
11.0 years ago by spacemorrissey ▴ 280
1
vote
0
replies
3.2k
views
Bigwig To Wig On Galaxy
galaxy bigwig
updated 11.4 years ago by 20 • written 12.0 years ago by ▴ 280
8
votes
5
replies
5.1k
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What Is The Best Software For Finding Footprints In Mouse Dnase-Seq Data?
updated 11.6 years ago by ▴ 220 • written 12.0 years ago by ▴ 280
0
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0
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3.0k
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Answer: A: How Do I Get A Phylop Input File?
11.7 years ago by spacemorrissey ▴ 280
0
votes
0
replies
10k
views
Answer: A: Overlapping And Unique Peaks In Chipseq
11.9 years ago by spacemorrissey ▴ 280
0
votes
2
replies
2.8k
views
What Is The Best Way To Get Data Back Off Of Galaxy?
galaxy
12.0 years ago by spacemorrissey ▴ 280
0
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0
replies
5.1k
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Comment: C: What Is The Best Software For Finding Footprints In Mouse Dnase-Seq Data?
12.0 years ago by spacemorrissey ▴ 280
1
vote
1
reply
5.1k
views
Answer: A: Rank Chip-Seq Peaks Based On Motif Occurrence?
12.1 years ago by spacemorrissey ▴ 280
0
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1
reply
7.3k
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Answer: A: Encode Data For Dnase-Seq Peaks
12.1 years ago by spacemorrissey ▴ 280
1
vote
1
reply
6.9k
views
Answer: A: A Call For Clear Information On How To Use F-Seq For Faire-Seq
12.1 years ago by spacemorrissey ▴ 280
2
votes
1
reply
5.3k
views
Answer: A: Differential Open Chromatin Locations From Dnase-Seq Data
12.1 years ago by spacemorrissey ▴ 280
1
vote
1
reply
8.4k
views
Answer: A: Chip-Seq Peak Calling Using Macs In Galaxy- Overlapping Peaks For Replicates
12.1 years ago by spacemorrissey ▴ 280
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