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replies
521
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Different rsID for the same chromsome, position, ref & alt allele depending on different data sources. Which one should I use?
UKB
rsID
UKB-PPP
ensembl-vep
dbsnp
7 months ago by
lsy9
▴ 20
2
votes
1
reply
549
views
How to assess performance of a GWAS analysis pipeline
benchmark
hail
GWAS
performance
updated 9 months ago by
Ram
44k • written 9 months ago by
lsy9
▴ 20
3
votes
2
replies
717
views
What is the best GWAS tool to use for a very large cohort data (UK Biobank data)?
BOLT-LMM
GWAS
regenie
SAIGE
hail
updated 9 months ago by
GenoMax
147k • written 9 months ago by
lsy9
▴ 20
2
votes
6
replies
1.4k
views
Installing ensemble VEP by running INSTALL.pl takes too long.
Ensembl
VEP
updated 14 months ago by
Ben Moore
★ 2.4k • written 14 months ago by
lsy9
▴ 20
0
votes
0
replies
1.4k
views
Comment:
Comment: Installing ensemble VEP by running INSTALL.pl takes too long.
14 months ago by
lsy9
▴ 20
0
votes
0
replies
890
views
Comment:
Comment: Calculating mean NES over gene set clusters (Enrichmentmap) in GSEA
3.4 years ago by
lsy9
▴ 20
0
votes
1
reply
890
views
Combining NES and FDR q-values over gene set clusters (Enrichmentmap) in GSEA
GSEA
3.4 years ago by
lsy9
▴ 20
1
vote
1
reply
3.3k
views
How to design WGCNA: one analysis over all sample or seperate analysis (using consensus module analysis)?
WGCNA
RNA-seq
updated 3.6 years ago by
Kevin Blighe
88k • written 3.6 years ago by
lsy9
▴ 20
1
vote
5
replies
2.2k
views
Why full-length sequencing is not possible in UMI-based methods in single-cell RNA-seq
rna-seq
sequencing
updated 3.8 years ago by
dsull
★ 6.9k • written 3.8 years ago by
lsy9
▴ 20
0
votes
0
replies
1.4k
views
Comment:
C: How RNAseq PCR amplication results in duplicates
3.8 years ago by
lsy9
▴ 20
4
votes
2
replies
1.4k
views
How RNAseq PCR amplication results in duplicates
RNA-Seq
sequencing
updated 3.8 years ago by
rpolicastro
13k • written 3.8 years ago by
lsy9
▴ 20
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