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3
votes
0
replies
2.1k
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Comment: Comment: Efficient querying of genomic reference databases with gget
2.5 years ago by pomodoro_sinensis ▴ 110
2
votes
1
reply
706
views
How are intron-containing transcripts captured in snRNA-seq?
snRNA-seq
updated 2.8 years ago by 13k • written 2.8 years ago by ▴ 110
0
votes
0
replies
734
views
Adding counts from two barcodes in anndata object
scRNA-seq anndata
2.9 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
429
views
What is a read generation model?
reads
2.9 years ago by pomodoro_sinensis ▴ 110
7
votes
1
reply
8.8k
views
Gzip output of fasterq-dump
SRA fasterq-dump
updated 3.0 years ago by 15k • written 3.0 years ago by ▴ 110
0
votes
0
replies
844
views
Comment: Comment: GEO scRNA-seq entry with cell type information?
3.1 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
844
views
GEO scRNA-seq entry with cell type information?
scRNA-seq
3.1 years ago by pomodoro_sinensis ▴ 110
1
vote
1
reply
1.8k
views
Does SCVI automatically use highly variable genes?
scRNA-seq SCVI Highly variable genes
updated 3.1 years ago by ▴ 10 • written 3.8 years ago by ▴ 110
0
votes
1
reply
718
views
What is each sample?
scRNA-seq
3.7 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
852
views
Comment: C: Where can I find the raw data for this GSE entry?
3.7 years ago by pomodoro_sinensis ▴ 110
0
votes
3
replies
852
views
Where can I find the raw data for this GSE entry?
GSE
updated 20 months ago by 44k • written 3.7 years ago by ▴ 110
0
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1
reply
4.1k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.8 years ago by pomodoro_sinensis ▴ 110
0
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0
replies
4.1k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.8 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
4.1k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.8 years ago by pomodoro_sinensis ▴ 110
20
votes
17
replies
4.1k
views
How to add "transcript" feature to a gtf file?
gtf
updated 16 months ago by ★ 1.2k • written 3.8 years ago by ▴ 110
1
vote
2
replies
806
views
What gene mouse IDs are these?
gene mouse ID
updated 3.8 years ago by 85k • written 3.8 years ago by ▴ 110
1
vote
7
replies
2.9k
views
Is anybody experiencing problems downloading from the SRA?
SRA
updated 20 months ago by 44k • written 4.0 years ago by ▴ 110
0
votes
0
replies
1.3k
views
Comment: C: Unable to find this E coli genome
3.9 years ago by pomodoro_sinensis ▴ 110
0
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1
reply
1.3k
views
Comment: C: Unable to find this E coli genome
3.9 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
1.3k
views
Comment: C: Unable to find this E coli genome
3.9 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
1.3k
views
Comment: C: Unable to find this E coli genome
3.9 years ago by pomodoro_sinensis ▴ 110
0
votes
6
replies
1.3k
views
Unable to find this E coli genome
ensembl bacteria E-coli genome
updated 20 months ago by 44k • written 3.9 years ago by ▴ 110
0
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0
replies
1.1k
views
Comment: C: How to choose the appropriate gtf file?
3.9 years ago by pomodoro_sinensis ▴ 110
1
vote
2
replies
1.1k
views
How to choose the appropriate gtf file?
gtf genome human
3.9 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
638
views
How do you add up the results from two barcodes in an anndata object?
scRNA-seq anndata
4.0 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: Is anybody experiencing problems downloading from the SRA?
4.0 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: Is anybody experiencing problems downloading from the SRA?
4.0 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.4k
views
Comment: C: How can I find the position of a sequence in a fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.4k
views
Comment: C: How can I find the position of a sequence in a fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.4k
views
Comment: C: How can I find the position of a sequence in a fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
7
replies
1.4k
views
How can I find the position of a sequence in a fastq file
fastq sequence position find
updated 4.1 years ago by 147k • written 4.1 years ago by ▴ 110
0
votes
0
replies
2.3k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.3k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.3k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
2.3k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
4.1 years ago by pomodoro_sinensis ▴ 110
1
vote
8
replies
2.3k
views
Why does this 10x scRNA-seq data set have one read instead of two reads?
10x scRNA-seq reads SRA
updated 4.1 years ago by 147k • written 4.1 years ago by ▴ 110
0
votes
1
reply
2.6k
views
Comment: C: Problems with fastq-dump generating a single fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.6k
views
Comment: C: Problems with fastq-dump generating a single fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.6k
views
Comment: C: Problems with fastq-dump generating a single fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.6k
views
Comment: C: Problems with fastq-dump generating a single fastq file
4.1 years ago by pomodoro_sinensis ▴ 110
1
vote
11
replies
2.6k
views
Problems with fastq-dump generating a single fastq file
fastq-dump pair-ended fastq
updated 4.1 years ago by 147k • written 4.1 years ago by ▴ 110
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