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3
votes
0
replies
1.9k
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Comment: Comment: Efficient querying of genomic reference databases with gget
23 months ago by pomodoro_sinensis ▴ 110
2
votes
1
reply
604
views
How are intron-containing transcripts captured in snRNA-seq?
snRNA-seq
updated 2.2 years ago by 13k • written 2.2 years ago by ▴ 110
0
votes
0
replies
645
views
Adding counts from two barcodes in anndata object
scRNA-seq anndata
2.3 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
381
views
What is a read generation model?
reads
2.4 years ago by pomodoro_sinensis ▴ 110
6
votes
1
reply
7.1k
views
Gzip output of fasterq-dump
SRA fasterq-dump
updated 2.4 years ago by 14k • written 2.4 years ago by ▴ 110
0
votes
0
replies
743
views
Comment: Comment: GEO scRNA-seq entry with cell type information?
2.6 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
743
views
GEO scRNA-seq entry with cell type information?
scRNA-seq
2.6 years ago by pomodoro_sinensis ▴ 110
1
vote
1
reply
1.6k
views
Does SCVI automatically use highly variable genes?
scRNA-seq SCVI Highly variable genes
updated 2.6 years ago by ▴ 10 • written 3.2 years ago by ▴ 110
0
votes
1
reply
661
views
What is each sample?
scRNA-seq
3.1 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
765
views
Comment: C: Where can I find the raw data for this GSE entry?
3.2 years ago by pomodoro_sinensis ▴ 110
0
votes
3
replies
765
views
Where can I find the raw data for this GSE entry?
GSE
updated 13 months ago by 43k • written 3.2 years ago by ▴ 110
0
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1
reply
3.3k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.2 years ago by pomodoro_sinensis ▴ 110
0
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0
replies
3.3k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.2 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
3.3k
views
Comment: C: How to add "transcript" feature to a gtf file?
3.3 years ago by pomodoro_sinensis ▴ 110
20
votes
17
replies
3.3k
views
How to add "transcript" feature to a gtf file?
gtf
updated 10 months ago by ★ 1.2k • written 3.3 years ago by ▴ 110
1
vote
2
replies
675
views
What gene mouse IDs are these?
gene mouse ID
updated 3.3 years ago by 82k • written 3.3 years ago by ▴ 110
1
vote
7
replies
2.6k
views
Is anybody experiencing problems downloading from the SRA?
SRA
updated 13 months ago by 43k • written 3.5 years ago by ▴ 110
0
votes
0
replies
1.1k
views
Comment: C: Unable to find this E coli genome
3.3 years ago by pomodoro_sinensis ▴ 110
0
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1
reply
1.1k
views
Comment: C: Unable to find this E coli genome
3.3 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
1.1k
views
Comment: C: Unable to find this E coli genome
3.3 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
1.1k
views
Comment: C: Unable to find this E coli genome
3.3 years ago by pomodoro_sinensis ▴ 110
0
votes
6
replies
1.1k
views
Unable to find this E coli genome
ensembl bacteria E-coli genome
updated 13 months ago by 43k • written 3.3 years ago by ▴ 110
0
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0
replies
970
views
Comment: C: How to choose the appropriate gtf file?
3.3 years ago by pomodoro_sinensis ▴ 110
1
vote
2
replies
970
views
How to choose the appropriate gtf file?
gtf genome human
3.3 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
599
views
How do you add up the results from two barcodes in an anndata object?
scRNA-seq anndata
3.4 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.6k
views
Comment: C: Is anybody experiencing problems downloading from the SRA?
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.6k
views
Comment: C: Is anybody experiencing problems downloading from the SRA?
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.2k
views
Comment: C: How can I find the position of a sequence in a fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.2k
views
Comment: C: How can I find the position of a sequence in a fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
1.2k
views
Comment: C: How can I find the position of a sequence in a fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
7
replies
1.2k
views
How can I find the position of a sequence in a fastq file
fastq sequence position find
updated 3.5 years ago by 142k • written 3.5 years ago by ▴ 110
0
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0
replies
2.0k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.0k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
0
replies
2.0k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
2
replies
2.0k
views
Comment: C: Why does this 10x scRNA-seq data set have one read instead of two reads?
3.5 years ago by pomodoro_sinensis ▴ 110
1
vote
8
replies
2.0k
views
Why does this 10x scRNA-seq data set have one read instead of two reads?
10x scRNA-seq reads SRA
updated 3.5 years ago by 142k • written 3.5 years ago by ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Problems with fastq-dump generating a single fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Problems with fastq-dump generating a single fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Problems with fastq-dump generating a single fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Problems with fastq-dump generating a single fastq file
3.5 years ago by pomodoro_sinensis ▴ 110
1
vote
11
replies
2.3k
views
Problems with fastq-dump generating a single fastq file
fastq-dump pair-ended fastq
updated 3.5 years ago by 142k • written 3.5 years ago by ▴ 110
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