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Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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752
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Comment: Comment: Make rownames more legible in R Heatmap
18 months ago by Ming Tommy Tang ★ 4.5k
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572
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Tutorial: Understanding Hierarchical Clustering in R, Distance Measures, and Linkage Methods
clustering gene-expression rstats
updated 18 months ago by 44k • written 18 months ago by ★ 4.5k
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1
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1.1k
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Answer: Answer: scRNA-seq subclustering
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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977
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Comment: Comment: How to interpret RNAseq output?
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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758
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Comment: Comment: change gene id to gene name
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.4k
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Comment: Comment: After R studio update, restrict view of columns in dataframe.
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.5k
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Answer: Answer: clustering changes in complex heatmap everytime
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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3.1k
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Comment: Comment: SRA-toolkit installation: "fastq-dump not found"
18 months ago by Ming Tommy Tang ★ 4.5k
1
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1
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888
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Comment: Comment: how to tell if the JackStrawPlot is good
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.4k
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Comment: Comment: After R studio update, restrict view of columns in dataframe.
18 months ago by Ming Tommy Tang ★ 4.5k
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3.9k
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Comment: Comment: SEACR and MACS2
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.7k
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Comment: Comment: Is there any way to access gnomAD data from R?
18 months ago by Ming Tommy Tang ★ 4.5k
1
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1
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888
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Comment: Comment: how to tell if the JackStrawPlot is good
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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611
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Answer: Answer: ANNOVAR Annotation of multiple VCF files error because of the absence of hg38_gn
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.4k
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Comment: Comment: GSEA documentation
18 months ago by Ming Tommy Tang ★ 4.5k
5
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0
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967
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Tutorial: How to do GSEA in R for RNAseq data
gsea RNAseq rstats
18 months ago by Ming Tommy Tang ★ 4.5k
5
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1
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9.2k
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Answer: Answer: Convert Human to Mouse Symbols
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.1k
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Comment: Comment: complex heatmap
18 months ago by Ming Tommy Tang ★ 4.5k
1
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1
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3.1k
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Comment: Comment: How to add VDJ clonotyping data to Seurat object of scRNA-seq
18 months ago by Ming Tommy Tang ★ 4.5k
1
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1
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3.1k
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Answer: Answer: How to add VDJ clonotyping data to Seurat object of scRNA-seq
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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887
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Comment: Comment: GSEA vs Functional Annotation
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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865
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Tutorial: How to read all files into a single dataframe (merge all RNAseq count table)
RNA-seq rstats
updated 18 months ago by 44k • written 18 months ago by ★ 4.5k
1
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0
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556
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Answer: Answer: How to remove batch effect from TCGA RNA-seq data?
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.3k
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Comment: Comment: Annotation of spatial data
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.8k
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Comment: Comment: Seurat: Log fold change and p value when control expression is 0
18 months ago by Ming Tommy Tang ★ 4.5k
1
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0
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1.3k
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Comment: Comment: Reads in IGV are mostly in intron regions
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.3k
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Answer: Answer: Annotation of spatial data
18 months ago by Ming Tommy Tang ★ 4.5k
2
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1
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3.8k
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Comment: Comment: Merge really large amount of Seurat objects
updated 18 months ago by 148k • written 18 months ago by ★ 4.5k
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0
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1.3k
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Comment: Comment: complex heatmap with CPM
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.3k
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Comment: Comment: Reads in IGV are mostly in intron regions
18 months ago by Ming Tommy Tang ★ 4.5k
0
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1
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1.3k
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Comment: Comment: Reads in IGV are mostly in intron regions
18 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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1.1k
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Comment: Comment: How to ask computational biology questions
18 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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1.3k
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Comment: Comment: Reads in IGV are mostly in intron regions
18 months ago by Ming Tommy Tang ★ 4.5k
1
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2
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1.1k
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Tutorial: How to ask computational biology questions
computational-biology
updated 18 months ago by 44k • written 18 months ago by ★ 4.5k
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0
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2.2k
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Comment: Comment: Calculating Average Coverage or Read Depth for a Sequence (WES)
18 months ago by Ming Tommy Tang ★ 4.5k
0
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1
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2.2k
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Comment: Comment: bar chart to show a p value of 0
18 months ago by Ming Tommy Tang ★ 4.5k
1
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0
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832
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Tutorial: How to pre-process scRNAseq data from fastq to count matrix with two lines of code
unix scRNA-seq single-cell rstats
updated 18 months ago by 44k • written 18 months ago by ★ 4.5k
1
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0
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1.2k
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Comment: Comment: How to interpret chipseq profile plot
18 months ago by Ming Tommy Tang ★ 4.5k
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1
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1.2k
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Answer: Answer: How to interpret chipseq profile plot
18 months ago by Ming Tommy Tang ★ 4.5k
3
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0
replies
888
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Tutorial: best practices for single-cell RNAseq analysis
cell single scRNAseq
18 months ago by Ming Tommy Tang ★ 4.5k
1
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0
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715
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Tutorial: How to make a perfect heatmap using RNAseq data
heatmap RNAseq rstats
18 months ago by Ming Tommy Tang ★ 4.5k
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0
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1.1k
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Tutorial: How to make a heatmap in R and deep understand it
heatmap r
20 months ago by Ming Tommy Tang ★ 4.5k
0
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1
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2.8k
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Comment: Comment: Align miRNA library (small RNA-seq) without trimming
21 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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2.0k
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Answer: Answer: Adding median value to VlnPlot in Seurat
21 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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3.8k
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Answer: Answer: how to know what adapter sequences to trim for RNA-seq?
21 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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2.3k
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Answer: Answer: Variant Calling with Multiple Individuals in Freebayes
21 months ago by Ming Tommy Tang ★ 4.5k
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2
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2.4k
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Answer: Answer: Log2 FC Threshold
21 months ago by Ming Tommy Tang ★ 4.5k
1
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0
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705
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Answer: Answer: Methylation data analysis
21 months ago by Ming Tommy Tang ★ 4.5k
0
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0
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1.1k
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Comment: Comment: SRA Data Download
21 months ago by Ming Tommy Tang ★ 4.5k
472 results • Page 3 of 10
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