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Comment: Comment: Get all the translation start site for human genome
updated 23 months ago by 44k • written 9.7 years ago by ★ 4.5k
4
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5
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Get all the translation start site for human genome
translation gene
updated 23 months ago by 44k • written 9.7 years ago by ★ 4.5k
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7.8k
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Comment: C: Script for extracting data from a tab-delimited file
9.7 years ago by Ming Tommy Tang ★ 4.5k
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3.8k
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Comment: Comment: Bam file view in ucsc
updated 23 months ago by 44k • written 9.7 years ago by ★ 4.5k
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3
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any tutorials for structural variants filtering and prioritization
structural-variants DNA-sequencing
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 4.5k
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Comment: C: any tutorials for structural variants filtering and prioritization
9.7 years ago by Ming Tommy Tang ★ 4.5k
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3.7k
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Comment: Comment: can anyone explain read id sorted in the samblaster page
updated 2.5 years ago by 44k • written 9.7 years ago by ★ 4.5k
2
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1
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3.6k
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yes, I probably do not quite understand heatmap
heatmap
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 4.5k
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1
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7.1k
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Comment: Comment: limma 2 factor contrast matrix design
updated 2.9 years ago by 44k • written 9.8 years ago by ★ 4.5k
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3
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limma 2 factor contrast matrix design
microarray limma
updated 2.9 years ago by 44k • written 9.8 years ago by ★ 4.5k
1
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1
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8.1k
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Comment: Comment: Top MACS peaks from ChIP-seq look identical to input
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 4.5k
1
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1
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8.1k
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Comment: Comment: Top MACS peaks from ChIP-seq look identical to input
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 4.5k
2
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1
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8.1k
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Answer: Answer: Top MACS peaks from ChIP-seq look identical to input
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 4.5k
1
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0
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5.5k
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Comment: Comment: ChIPQC: a package for assessing quality of ChIP-seq samples and experiments
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 4.5k
6
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9
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htseq-count for pair-end RNA-seq
RNA-Seq
updated 3.3 years ago by 44k • written 10.7 years ago by ★ 4.5k
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1
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Answer: Answer: Metaseq: Average ChIP-seq signal over promoters error
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 4.5k
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Comment: Comment: Any tools to predict non-coding driver mutations
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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Answer: Answer: what's the publicly available TF binding ChIP-seq dataset with the highest cover
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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1
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2.6k
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Comment: C: ChIP-seq in cancer cell lines
10.1 years ago by Ming Tommy Tang ★ 4.5k
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Comment: Comment: histone mark associated with enhancers
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
4
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1
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6.6k
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Answer: Answer: histone mark associated with enhancers
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
6
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1
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Answer: Answer: What is the best way to match gene id with gene name.
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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1
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Comment: Comment: Plot the nucleosome distance to TSS
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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0
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11k
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Comment: Comment: RNAseq heatmap.2 log2FC clustering
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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0
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Comment: C: When Using Heatmap.2 From R To Make A Heatmap Of Microarray Data, How Are The Ge
10.1 years ago by Ming Tommy Tang ★ 4.5k
1
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1
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2.2k
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Answer: Answer: Tools to Choose For RNA-Seq Normalization?
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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1
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Answer: Answer: normalize on chip-seq data
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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0
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Answer: Answer: Identify gene symbols given a list of chromosome positions
updated 2.9 years ago by 44k • written 10.1 years ago by ★ 4.5k
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Comment: Comment: Chip-seq common control for two treatments
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
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2
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Answer: Answer: bedGraph -----> saving as a table in the other format
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
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0
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Comment: Comment: SNP in Transcription factor binding site analysis
updated 3.1 years ago by 44k • written 10.2 years ago by ★ 4.5k
1
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0
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Answer: A: Chip-seq motif conservation
10.2 years ago by Ming Tommy Tang ★ 4.5k
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0
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4.7k
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Comment: Comment: How to visualize the similarity between transcriptome expression in different co
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
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0
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2.2k
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Comment: Comment: Compare histone modification data with DNA methylation data
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
1
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1
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5.8k
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Answer: Answer: SNP in Transcription factor binding site analysis
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
1
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1
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5.2k
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Comment: Comment: converting bed file to heatmap data
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
1
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0
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1.9k
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Answer: Answer: How to get the binding site information
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
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0
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Comment: Comment: How to find out the significant gene from GDS.soft file by using bioconductor
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 4.5k
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0
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2.6k
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Answer: Answer: list of genes with associated histone marks
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
1
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0
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3.2k
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Answer: Answer: Wig file obtained from MACS14 is longer than chromosome size?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
0
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1
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4.2k
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Answer: Answer: How to determine genome wide Co-occupancy between two transcription factors?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
1
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1
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4.4k
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Answer: Answer: Stuck with my analysis (MNase-seq)
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
1
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0
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14k
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Answer: Answer: Where can I get the mouse mm9 gene annotation file?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
2
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0
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8.4k
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Comment: Comment: Concatenate the chromosome files from hsa19 into a single FASTA file
updated 3.1 years ago by 44k • written 10.3 years ago by ★ 4.5k
1
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1
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8.2k
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Answer: Answer: MeDip-seq data interpretation + analysis / MEDIPS, MACS2
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
0
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0
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3.1k
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Comment: Comment: What is a good ChIPseq peak distance cutoff?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
0
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1
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5.8k
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Comment: Comment: Reordering the bam file
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
0
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1
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1.8k
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Answer: Answer: What are less and greater in fc.kegg.p?
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 4.5k
0
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0
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6.4k
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Comment: C: what are the control samples when using MACS to find ChiP-seq peaks?
10.4 years ago by Ming Tommy Tang ★ 4.5k
1
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0
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3.7k
views
Answer: Answer: Chip-Seq GO analysis
updated 3.0 years ago by 44k • written 10.4 years ago by ★ 4.5k
472 results • Page 8 of 10
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