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What are the industry-leading methods of benchmarking metagenomics taxonomy identification?
metagenomics taxonomy
updated 2.6 years ago by • 0 • written 7.1 years ago by ▴ 1000
0
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1
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4.4k
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Comment: C: How to calculate differential gene expression from single sample on Affy GeneChi
updated 5.6 years ago by 45k • written 9.9 years ago by ▴ 1000
4
votes
5
replies
5.1k
views
What is the expected rate of SNPs within a human exome sequencing with HiSeq?
SNP exome highseq
updated 7.5 years ago by ★ 2.1k • written 9.2 years ago by ▴ 1000
28
votes
4
replies
25k
views
Converting Gff/Gtf + Reference To Embl Or Genbank ...Any Tools Available?
gff genbank
updated 8.7 years ago by • 0 • written 12.1 years ago by ▴ 1000
25
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10
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21k
views
6 follow
How To Batch Grab All Ko (Kegg Ontology) Terms Associated With Each Kegg Pathway?
kegg pathway
updated 2.9 years ago by 45k • written 11.8 years ago by ▴ 1000
0
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3
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2.4k
views
Nextseq 500 sample exome data
nextseq exome
updated 2.9 years ago by 45k • written 9.4 years ago by ▴ 1000
2
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2
replies
3.8k
views
Software For Determining Pathway Differential Expression For Annotated Ngs Data?
pathway ngs differential expression
updated 9.1 years ago by ▴ 130 • written 11.8 years ago by ▴ 1000
4
votes
4
replies
11k
views
Kegg Id Vs Cog Id, And The Best Method For Large Batch Id Assignment?
kegg annotation pathway
updated 4.0 years ago by ▴ 160 • written 12.1 years ago by ▴ 1000
6
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4
replies
4.8k
views
Correcting batch effects between RPKM datasets?
DGE RNA-Seq batch RPKM
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 1000
3
votes
2
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3.2k
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Are there any software packages available to calculate ploidy from RNA-Seq data?
RNA-Seq CNV ploidy
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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1
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5.3k
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Comment: Comment: What is a microarray "signature" and how can I compare my sample to a known sign
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
1
vote
7
replies
5.3k
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What is a microarray "signature" and how can I compare my sample to a known signature?
microarray NGS chip
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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1
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5.3k
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Comment: Comment: What is a microarray "signature" and how can I compare my sample to a known sign
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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1
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5.3k
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Comment: Comment: What is a microarray "signature" and how can I compare my sample to a known sign
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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0
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5.6k
views
Comment: Comment: How to cluster microarray samples based on euclidean distance and a complete lin
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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0
replies
5.6k
views
Comment: C: How to cluster microarray samples based on euclidean distance and a complete lin
9.9 years ago by JacobS ▴ 1000
0
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1
reply
5.6k
views
Comment: Comment: How to cluster microarray samples based on euclidean distance and a complete lin
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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1
reply
5.6k
views
Comment: Comment: How to cluster microarray samples based on euclidean distance and a complete lin
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
votes
0
replies
5.6k
views
Comment: C: How to cluster microarray samples based on euclidean distance and a complete lin
9.9 years ago by JacobS ▴ 1000
0
votes
0
replies
5.6k
views
Comment: Comment: How to cluster microarray samples based on euclidean distance and a complete lin
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
votes
1
reply
5.6k
views
Comment: Comment: How to cluster microarray samples based on euclidean distance and a complete lin
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
5
votes
12
replies
5.6k
views
How to cluster microarray samples based on euclidean distance and a complete linkage metric?
microarray clustering DGE
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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0
replies
4.4k
views
Comment: C: How to calculate differential gene expression from single sample on Affy GeneChi
9.9 years ago by JacobS ▴ 1000
0
votes
0
replies
4.4k
views
Comment: C: How to calculate differential gene expression from single sample on Affy GeneChi
9.9 years ago by JacobS ▴ 1000
5
votes
11
replies
4.4k
views
How to calculate differential gene expression from single sample on Affy GeneChip?
microarray genechip affy
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
0
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1
reply
4.4k
views
Comment: C: How to calculate differential gene expression from single sample on Affy GeneChi
9.9 years ago by JacobS ▴ 1000
0
votes
1
reply
4.4k
views
Comment: C: How to calculate differential gene expression from single sample on Affy GeneChi
9.9 years ago by JacobS ▴ 1000
0
votes
0
replies
4.4k
views
Comment: Comment: How to calculate differential gene expression from single sample on Affy GeneChi
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 1000
2
votes
2
replies
2.8k
views
How Can I Perform Multiple Local Alignments In Jalview?
jalview
updated 2.4 years ago by 45k • written 11.7 years ago by ▴ 1000
12
votes
5
replies
7.7k
views
Are There Any Scripts That Make Images From Gff Files?
gff
updated 11.2 years ago by 105k • written 11.2 years ago by ▴ 1000
0
votes
4
replies
3.7k
views
What Software Can Be Used To Attempt To Improve An Assembly By Filling Targeted Gaps Or Premature Contigs Endings?
assembly ngs
updated 11.4 years ago by 20 • written 11.5 years ago by ▴ 1000
0
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0
replies
3.7k
views
Comment: C: What Software Can Be Used To Attempt To Improve An Assembly By Filling Targeted
11.5 years ago by JacobS ▴ 1000
3
votes
5
replies
4.4k
views
Vanilla Local Galaxy Installation Is Giving Error: "No Module Called Eggs"
galaxy python
updated 11.5 years ago by ▴ 10 • written 11.5 years ago by ▴ 1000
0
votes
0
replies
5.8k
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Comment: C: Need A Unix Script For The Galaxy Tool: Maf To Fasta (Version 1.0.1)
11.5 years ago by JacobS ▴ 1000
0
votes
1
reply
5.8k
views
Comment: C: Need A Unix Script For The Galaxy Tool: Maf To Fasta (Version 1.0.1)
11.5 years ago by JacobS ▴ 1000
4
votes
5
replies
5.8k
views
Need A Unix Script For The Galaxy Tool: Maf To Fasta (Version 1.0.1)
maf galaxy
updated 11.5 years ago by 166k • written 11.5 years ago by ▴ 1000
3
votes
1
reply
5.5k
views
Snp Detection In Viruses: Does A Haploid Caller Like Freebayes Need To Be Used Instead Of Something Like Samtools/Bcftools?
variant-calling snp
updated 11.5 years ago by ★ 2.5k • written 11.5 years ago by ▴ 1000
0
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1
reply
5.3k
views
Comment: C: What'S Easy Framework For Writing Gui Tools In Bioinformatics
11.6 years ago by JacobS ▴ 1000
0
votes
1
reply
2.3k
views
Comment: C: Need Suggestions For A Greedy Algorithm For Thoroughly Assembling Very Short Rea
11.7 years ago by JacobS ▴ 1000
4
votes
3
replies
2.3k
views
Need Suggestions For A Greedy Algorithm For Thoroughly Assembling Very Short Reads
assembly
updated 11.7 years ago by ▴ 980 • written 11.7 years ago by ▴ 1000
1
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0
replies
3.9k
views
Answer: Answer: Understanding Amino Acid Patterns.
updated 2.3 years ago by 45k • written 11.7 years ago by ▴ 1000
0
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0
replies
8.2k
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Comment: C: Is This A Valid Gff3 File For Htseq?
11.7 years ago by JacobS ▴ 1000
0
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1
reply
8.2k
views
Answer: A: Is This A Valid Gff3 File For Htseq?
11.7 years ago by JacobS ▴ 1000
2
votes
1
reply
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
0
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0
replies
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
54
votes
22
replies
18k
views
10 follow
Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
human
updated 11.7 years ago by ▴ 270 • written 11.7 years ago by ▴ 1000
2
votes
2
replies
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
1
vote
1
reply
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
0
votes
0
replies
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
1
vote
1
reply
18k
views
Comment: C: Sequencing Your Own Genome! How Can It Be Done? Has Anyone Here Done It?
11.7 years ago by JacobS ▴ 1000
91 results • Page 1 of 2
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