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3
votes
2
replies
1.6k
views
is there a tool to recover corrupted fastq files
fastq short-read
updated 13 months ago by • 0 • written 16 months ago by ▴ 70
3
votes
5
replies
1.2k
views
Tutorial for analyzing WGBS data
NGS methylseq WGBS
15 months ago by pt.taklifi ▴ 70
0
votes
0
replies
1.2k
views
Comment: Comment: Tutorial for analyzing WGBS data
15 months ago by pt.taklifi ▴ 70
0
votes
0
replies
1.2k
views
Comment: Comment: Tutorial for analyzing WGBS data
15 months ago by pt.taklifi ▴ 70
0
votes
0
replies
1.2k
views
Comment: Comment: Tutorial for analyzing WGBS data
15 months ago by pt.taklifi ▴ 70
0
votes
2
replies
1.1k
views
are there any downloadable database for tissue specific DMRs?
t-DMR
updated 3.7 years ago by ▴ 80 • written 4.0 years ago by ▴ 70
0
votes
0
replies
995
views
annotating regions with annotate Peak and ucsc refGene gives different answers in some cases
gene_names r ngs annotate
3.9 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.3k
views
Comment: Comment: gene expression for a specific gene across for multiple cancer types in TCGA dat
4.0 years ago by pt.taklifi ▴ 70
1
vote
4
replies
1.3k
views
gene expression for a specific gene across for multiple cancer types in TCGA datasets
gene_expression TCGA RTCAG
4.0 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.3k
views
Comment: Comment: gene expression for a specific gene across for multiple cancer types in TCGA dat
4.0 years ago by pt.taklifi ▴ 70
0
votes
1
reply
1.8k
views
Comment: Comment: ATACseq batch effect coupled with biological effect
4.1 years ago by pt.taklifi ▴ 70
1
vote
3
replies
1.8k
views
ATACseq batch effect coupled with biological effect
batch-effect ATAC-seq
updated 2.0 years ago by 45k • written 4.1 years ago by ▴ 70
0
votes
0
replies
7.1k
views
Comment: Comment: How to create SAF from text file for FeatureCounts
4.1 years ago by pt.taklifi ▴ 70
0
votes
1
reply
7.1k
views
Comment: Comment: How to create SAF from text file for FeatureCounts
4.1 years ago by pt.taklifi ▴ 70
0
votes
0
replies
7.1k
views
Comment: Comment: How to create SAF from text file for FeatureCounts
4.1 years ago by pt.taklifi ▴ 70
7
votes
6
replies
7.1k
views
How to create SAF from text file for FeatureCounts
featureCounts ATAC-seq
updated 10 months ago by ▴ 70 • written 4.1 years ago by ▴ 70
0
votes
0
replies
3.3k
views
Comment: Comment: get count matrix from bam files
4.1 years ago by pt.taklifi ▴ 70
2
votes
2
replies
3.3k
views
get count matrix from bam files
bam ATAC-seq
updated 2.0 years ago by 45k • written 4.1 years ago by ▴ 70
0
votes
0
replies
1.8k
views
how to get feature importance after SVM
high_dimensional SVM R
4.2 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.6k
views
Comment: Comment: How to implement k fold cv after randomForest
4.2 years ago by pt.taklifi ▴ 70
1
vote
2
replies
1.6k
views
How to implement k fold cv after randomForest
k_fold_cv R randomForest
4.2 years ago by pt.taklifi ▴ 70
2
votes
3
replies
937
views
How to remove repeats on galaxy
alignment repeats galaxy
updated 4.3 years ago by 20 • written 4.4 years ago by ▴ 70
0
votes
1
reply
1.3k
views
Comment: C: how to select features for high dimension data?
4.3 years ago by pt.taklifi ▴ 70
1
vote
1
reply
1.0k
views
how to determine low quality variants in vcf files
vcf variant_depth
4.3 years ago by pt.taklifi ▴ 70
0
votes
0
replies
3.8k
views
Comment: C: Merge bigwig Files with different intervals
4.3 years ago by pt.taklifi ▴ 70
1
vote
9
replies
3.8k
views
Merge bigwig Files with different intervals
bigwig Merge
4.3 years ago by pt.taklifi ▴ 70
2
votes
1
reply
2.6k
views
bedGraphToBigWig error : Expecting at least 3 words line 1 of chrom.sizes. got 2
bigwig bedGraph
updated 4.3 years ago by 88k • written 4.3 years ago by ▴ 70
0
votes
1
reply
3.8k
views
Comment: C: Merge bigwig Files with different intervals
4.3 years ago by pt.taklifi ▴ 70
4
votes
6
replies
8.9k
views
how to remove duplicates with picard
alignment deduplication
updated 4.3 years ago by 166k • written 4.3 years ago by ▴ 70
0
votes
0
replies
8.9k
views
Comment: C: how to remove duplicates with picard
4.3 years ago by pt.taklifi ▴ 70
0
votes
0
replies
8.9k
views
Comment: C: how to remove duplicates with picard
4.3 years ago by pt.taklifi ▴ 70
2
votes
1
reply
1.6k
views
samtools index error
alignment
updated 4.3 years ago by 166k • written 4.3 years ago by ▴ 70
8
votes
3
replies
1.3k
views
how to select features for high dimension data?
machine-learning
updated 19 months ago by 45k • written 4.3 years ago by ▴ 70
7
votes
6
replies
2.3k
views
nohup with while loop
bash loop SRAtoolkit
4.3 years ago by pt.taklifi ▴ 70
0
votes
0
replies
2.3k
views
Comment: C: nohup with while loop
4.4 years ago by pt.taklifi ▴ 70
0
votes
0
replies
2.3k
views
Comment: C: nohup with while loop
4.4 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.4k
views
Comment: C: error with bowtie2 alignment
4.4 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.4k
views
Comment: C: error with bowtie2 alignment
4.4 years ago by pt.taklifi ▴ 70
0
votes
1
reply
1.4k
views
Comment: C: error with bowtie2 alignment
4.4 years ago by pt.taklifi ▴ 70
2
votes
6
replies
1.4k
views
error with bowtie2 alignment
alignment error sequencing
4.4 years ago by pt.taklifi ▴ 70
0
votes
1
reply
1.8k
views
Comment: C: bcftools variant calling
4.4 years ago by pt.taklifi ▴ 70
0
votes
0
replies
1.1k
views
Comment: C: sum of values in a column
4.4 years ago by pt.taklifi ▴ 70
0
votes
1
reply
1.1k
views
Comment: C: sum of values in a column
4.4 years ago by pt.taklifi ▴ 70
4
votes
5
replies
1.1k
views
sum of values in a column
r
4.4 years ago by pt.taklifi ▴ 70
3
votes
3
replies
1.9k
views
remove mitochondrial reads using Bowtie2
alignment
updated 4.4 years ago by ★ 5.2k • written 4.4 years ago by ▴ 70
0
votes
1
reply
1.8k
views
Comment: C: bigwigs to reads in peaks
4.4 years ago by pt.taklifi ▴ 70
0
votes
1
reply
1.8k
views
Comment: C: bigwigs to reads in peaks
4.4 years ago by pt.taklifi ▴ 70
0
votes
5
replies
1.8k
views
bigwigs to reads in peaks
R atac-seq
updated 2.0 years ago by 45k • written 4.4 years ago by ▴ 70
0
votes
0
replies
5.9k
views
Comment: C: how to resolve "command not found " error on macOS
4.5 years ago by pt.taklifi ▴ 70
0
votes
1
reply
5.9k
views
Comment: C: how to resolve "command not found " error on macOS
4.5 years ago by pt.taklifi ▴ 70
68 results • Page 1 of 2
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