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How to define a clonotype by its TCR sequencing data with its own structure.
TCR sequencing clonotype scRNA
20 days ago by diqixiaoyaoer ▴ 20
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1
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593
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Comment: Comment: Some questions about motif enrichment in Homer
3 months ago by diqixiaoyaoer ▴ 20
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5
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593
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Some questions about motif enrichment in Homer
motif-enrichment methylation DNA
updated 7 days ago by ▴ 20 • written 3 months ago by ▴ 20
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0
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593
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Comment: Comment: Some questions about motif enrichment in Homer
3 months ago by diqixiaoyaoer ▴ 20
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0
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919
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Comment: Comment: Download SRR by parallel and fastq dump with a weird problem
6 months ago by diqixiaoyaoer ▴ 20
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0
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919
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Comment: Comment: Download SRR by parallel and fastq dump with a weird problem
6 months ago by diqixiaoyaoer ▴ 20
0
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7
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919
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Download SRR by parallel and fastq dump with a weird problem
scRNA-seq linux parallel
6 months ago by diqixiaoyaoer ▴ 20
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0
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919
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Comment: Comment: Download SRR by parallele and fastq dump with a wired problem
6 months ago by diqixiaoyaoer ▴ 20
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1
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1.1k
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Comment: Comment: In one PCA plot, can I calculate the percentage of different factors that contri
7 months ago by diqixiaoyaoer ▴ 20
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1
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1.1k
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Comment: Comment: In one PCA plot, can I calculate the percentage of different factors that contri
7 months ago by diqixiaoyaoer ▴ 20
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9
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1.1k
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In one PCA plot, can I calculate the percentage of different factors that contribute to the PCA?
PCA R VARIANCE
updated 7 months ago by ▴ 160 • written 7 months ago by ▴ 20
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1.1k
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Answer: Answer: In one PCA plot, can I calculate the percentage of different factors that contri
7 months ago by diqixiaoyaoer ▴ 20
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0
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1.1k
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Comment: Comment: In one PCA plot, can I calculate the percentage of different factors that contri
7 months ago by diqixiaoyaoer ▴ 20
0
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1
reply
1.1k
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Comment: Comment: In one PCA plot, can I calculate the percentage of different factors that contri
7 months ago by diqixiaoyaoer ▴ 20
0
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0
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669
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Comment: Comment: How to get human-mouse conservation score from UCSC
8 months ago by diqixiaoyaoer ▴ 20
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1
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669
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Comment: Comment: How to get human-mouse conservation score from UCSC
8 months ago by diqixiaoyaoer ▴ 20
1
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4
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669
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How to get human-mouse conservation score from UCSC
conservation mouse IGV human score
8 months ago by diqixiaoyaoer ▴ 20
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1
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669
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Comment: Comment: How to get human-mouse conservation score from UCSC
8 months ago by diqixiaoyaoer ▴ 20
1
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3
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871
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Merge or integrate multiple samples and then do downstream analysis
Seurat
updated 13 months ago by 86k • written 13 months ago by ▴ 20
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1
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871
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Comment: Comment: Merge or integrate multiple samples and then do downstream analysis
13 months ago by diqixiaoyaoer ▴ 20
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2.5k
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Comment: Comment: Cellranger count with error information "... which wasn't expected, or isn't va
21 months ago by diqixiaoyaoer ▴ 20
4
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7
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2.5k
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Cellranger count with error information "... which wasn't expected, or isn't valid in this context"
count cellranger scRNAseq
updated 16 months ago by ▴ 340 • written 21 months ago by ▴ 20
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0
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435
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Something wrong with my code concerning bsseq visualization
bsseq plotRegion R
21 months ago by diqixiaoyaoer ▴ 20
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0
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689
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Comment: Comment: How to add gene information below the BSmooth result ?
21 months ago by diqixiaoyaoer ▴ 20
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2
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689
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How to add gene information below the BSmooth result ?
BSmooth methylation DNA
21 months ago by diqixiaoyaoer ▴ 20
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1
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700
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Aproblem concerning methylation profiles of gene: how to add gene information below the BSmooth result?
BSmooth methylation R DNA
21 months ago by diqixiaoyaoer ▴ 20
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0
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700
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Answer: Answer: Aproblem concerning methylation profiles of gene: how to add gene information be
21 months ago by diqixiaoyaoer ▴ 20
0
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1
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602
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How to get the MuTaME scores results ?
MuTaME lncRNA
2.3 years ago by diqixiaoyaoer ▴ 20
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0
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602
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Comment: Comment: How to get the MuTaME scores results ?
2.3 years ago by diqixiaoyaoer ▴ 20
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1
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1.1k
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Comment: Comment: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
2.6 years ago by diqixiaoyaoer ▴ 20
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4
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1.1k
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Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
UTR miRNAseq
updated 2.6 years ago by ★ 1.6k • written 2.6 years ago by ▴ 20
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0
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1.1k
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Comment: Comment: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
2.6 years ago by diqixiaoyaoer ▴ 20
0
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2
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873
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The Difference Between Genome Reference(scRNAseq) And Transcriptome Reference(bulk RNAseq)
scRNAseq
updated 2.9 years ago by 14k • written 2.9 years ago by ▴ 20
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873
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Comment: Comment: The Difference Between Genome Reference(scRNAseq) And Transcriptome Reference(bu
2.9 years ago by diqixiaoyaoer ▴ 20
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1.8k
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Comment: Comment: Reference genome
2.9 years ago by diqixiaoyaoer ▴ 20
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1
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1.3k
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Comment: Comment: VisCello Shiny app code for hosting snRNA-seq data
3.4 years ago by diqixiaoyaoer ▴ 20
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0
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2.2k
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Comment: Comment: How to add space in specific location in a barplot using ggplot2
3.7 years ago by diqixiaoyaoer ▴ 20
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2
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2.2k
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Comment: Comment: How to add space in specific location in a barplot using ggplot2
3.7 years ago by diqixiaoyaoer ▴ 20
1
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6
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2.2k
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How to add space in specific location in a barplot using ggplot2
GROUPING R GGPLOT2
updated 3.7 years ago by 44k • written 3.7 years ago by ▴ 20
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0
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828
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Answer: A: How to deal with the NA results in corr.test using log2(x+1)?
3.9 years ago by diqixiaoyaoer ▴ 20
0
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1
reply
828
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How to deal with the NA results in corr.test using log2(x+1)?
R cor log2
3.9 years ago by diqixiaoyaoer ▴ 20
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0
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1.0k
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Comment: C: which kind of normalization is suitable for corr.test
3.9 years ago by diqixiaoyaoer ▴ 20
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5
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1.0k
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which kind of normalization is suitable for corr.test
R RNA-Seq gene
updated 3.9 years ago by ▴ 110 • written 3.9 years ago by ▴ 20
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0
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1.0k
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Comment: C: which kind of normalization is suitable for corr.test
3.9 years ago by diqixiaoyaoer ▴ 20
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