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867
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Answer: Answer: Pathway enrichment analysis
17 months ago by liux.bio ▴ 360
0
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0
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4.1k
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Answer: Answer: KEGG pathway maps
17 months ago by liux.bio ▴ 360
1
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0
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1.6k
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Answer: Answer: GSEA analysis and pathway mapping
17 months ago by liux.bio ▴ 360
3
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5
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4.7k
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How to filter out the non-coding genes?
bioconductor genome
updated 3.2 years ago by 44k • written 10.6 years ago by ▴ 360
0
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1
reply
2.0k
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Ask for suggestions of filtering probes in affymetrix data
microarray Affymetrix
updated 5.3 years ago by 20 • written 5.5 years ago by ▴ 360
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0
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1.5k
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Comment: C: Could not reproduce the results (MA-plot) in the paper when analyzing two-color
5.6 years ago by liux.bio ▴ 360
4
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2
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1.5k
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Could not reproduce the results (MA-plot) in the paper when analyzing two-color Microarray data with Limma.
R Microarray limma
updated 5.6 years ago by 86k • written 5.6 years ago by ▴ 360
0
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0
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2.6k
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Tool: PPIExp: a web-based platform for visualizing dynamic protein-protein interaction networks (active PPI subnetworks )
interactive-visualization Dynamic-PPI-networks
updated 18 months ago by 44k • written 5.8 years ago by ▴ 360
0
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0
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1.5k
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Answer: A: question about TF enrichment analysis
5.8 years ago by liux.bio ▴ 360
0
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0
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9.3k
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Comment: C: How to map and visualize differentially expressed genes on KEGG pathways
5.9 years ago by liux.bio ▴ 360
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0
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9.3k
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Answer: A: How to map and visualize differentially expressed genes on KEGG pathways
5.9 years ago by liux.bio ▴ 360
0
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0
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2.5k
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Answer: A: stringDB PPI network with Log fold change?
6.0 years ago by liux.bio ▴ 360
0
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1
reply
1.6k
views
How to predict receptors of a ligand?
receptor prediction
6.2 years ago by liux.bio ▴ 360
4
votes
3
replies
6.0k
views
Tool: KeggExp: a web server for visualizing KEGG pathways maps when analyzing expression profile data
expression-profile-data pathway-visualization
17 months ago by liux.bio ▴ 360
17
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2
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7.0k
views
Answer: A: How to build a bioinformatics server
6.4 years ago by liux.bio ▴ 360
0
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0
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1.4k
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Answer: A: Transcription Factors in common
6.5 years ago by liux.bio ▴ 360
0
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1
reply
1.2k
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Comment: C: displaying graphs in R
6.5 years ago by liux.bio ▴ 360
0
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1
reply
7.0k
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Comment: C: How to build a bioinformatics server
6.5 years ago by liux.bio ▴ 360
3
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0
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1.8k
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Answer: A: How can i do enrichment analysis more precisely for differential expression anal
6.5 years ago by liux.bio ▴ 360
0
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0
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5.7k
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Answer: A: Map gene list to pathway and visualize it
6.6 years ago by liux.bio ▴ 360
0
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1
reply
6.0k
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Comment: C: KeggExp: a web server for visualizing KEGG pathways maps when analyzing expressi
6.6 years ago by liux.bio ▴ 360
28
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6
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40k
views
6 follow
How To Get The Subclusters From The Object Of Hclust() Using Cutree() According To The Order On The Map Produced By Heatmap.2?
updated 6.9 years ago by ▴ 160 • written 11.1 years ago by ▴ 360
1
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4
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5.8k
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How To Determine The Promoter Region When Look For Over-Represented Transcription Factor Binding Sites?
transcription-factor
updated 6.9 years ago by 20 • written 11.0 years ago by ▴ 360
0
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0
replies
2.6k
views
How to filter genes in time course RNA-seq experiments with two replicates for clustering?
cluster rna-seq
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 360
0
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1
reply
53k
views
Comment: C: List Of All Transcription Factors In Human
10.4 years ago by liux.bio ▴ 360
0
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0
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4.7k
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Comment: C: How to filter out the non-coding genes?
10.6 years ago by liux.bio ▴ 360
0
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1
reply
36k
views
Comment: C: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
11.0 years ago by liux.bio ▴ 360
0
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1
reply
3.8k
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Comment: C: How To Get Non-Overlapping Sequences Of Introns, Utrs, Flanking Regions For A Ge
11.0 years ago by liux.bio ▴ 360
0
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3
replies
3.8k
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How To Get Non-Overlapping Sequences Of Introns, Utrs, Flanking Regions For A Gene?
bioconductor utr
11.0 years ago by liux.bio ▴ 360
0
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2
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5.8k
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Comment: C: How To Determine The Promoter Region When Look For Over-Represented Transcriptio
11.0 years ago by liux.bio ▴ 360
0
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0
replies
5.1k
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Comment: C: How To Combine Cytoscape App “Bingo” With David?
11.1 years ago by liux.bio ▴ 360
0
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2
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5.1k
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How To Combine Cytoscape App “Bingo” With David?
cytoscape
updated 11.1 years ago by ▴ 890 • written 11.1 years ago by ▴ 360
0
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0
replies
30k
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Comment: C: Determine Transcription Factors For Genes
11.1 years ago by liux.bio ▴ 360
0
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0
replies
40k
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Comment: C: How To Get The Subclusters From The Object Of Hclust() Using Cutree() According
11.1 years ago by liux.bio ▴ 360
0
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0
replies
40k
views
Comment: C: How To Get The Subclusters From The Object Of Hclust() Using Cutree() According
11.1 years ago by liux.bio ▴ 360
0
votes
0
replies
11k
views
Comment: C: How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
11.1 years ago by liux.bio ▴ 360
0
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1
reply
11k
views
Comment: C: How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
11.1 years ago by liux.bio ▴ 360
1
vote
5
replies
11k
views
How To Use Clusgap() When The Cluster Method Is Hierarchical Clustering?
r clustering
updated 11.1 years ago by 55k • written 11.1 years ago by ▴ 360
0
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0
replies
3.7k
views
Comment: C: How To Get Tissue-Specific Protein-Protein Interactions?
11.2 years ago by liux.bio ▴ 360
2
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2
replies
3.7k
views
How To Get Tissue-Specific Protein-Protein Interactions?
11.3 years ago by liux.bio ▴ 360
0
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0
replies
5.1k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
11.4 years ago by liux.bio ▴ 360
0
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0
replies
5.1k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
11.4 years ago by liux.bio ▴ 360
8
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9
replies
5.1k
views
Identify Differentially Expressed Genes With Two Groups In Which There Are Only Two Replicates
microarray differential-expression
updated 11.5 years ago by 5.2k • written 11.5 years ago by ▴ 360
0
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0
replies
5.1k
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Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
11.5 years ago by liux.bio ▴ 360
0
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1
reply
5.1k
views
Comment: C: Identify Differentially Expressed Genes With Two Groups In Which There Are Only
11.5 years ago by liux.bio ▴ 360
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