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0
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2
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1.2k
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Two spatial transcriptomics datasets from same patient
Transcriptomics spatial
updated 23 months ago by 4.7k • written 3.2 years ago by ▴ 500
0
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0
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1.1k
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Comment: Comment: Spatial transcriptomics analyses: Comparing gene expression between biological r
3.2 years ago by David_emir ▴ 500
0
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0
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1.9k
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Comment: Comment: Extracting genes form Components : NMF analysis
3.5 years ago by David_emir ▴ 500
0
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1
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1.9k
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Comment: Comment: Extracting genes form Components : NMF analysis
3.5 years ago by David_emir ▴ 500
0
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4
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1.9k
views
Extracting genes form Components : NMF analysis
NMF components rcppml scRNA
3.5 years ago by David_emir ▴ 500
0
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0
replies
583
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H & E images ANALYSIS protocol
analysis image HnE
3.8 years ago by David_emir ▴ 500
0
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1
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1.8k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
4.2 years ago by David_emir ▴ 500
0
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1
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1.8k
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Comment: Comment: Extracting only tumor samples from Single cell RNASeq
4.2 years ago by David_emir ▴ 500
2
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5
replies
1.8k
views
Extracting only tumor samples from Single cell RNASeq
tumor cell singel RNA
updated 4.2 years ago by ★ 19k • written 4.2 years ago by ▴ 500
3
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7
replies
14k
views
Seurat Clustering - Cluster Numbers from 1 instead of 0
RNA-Seq seurat Cluster numbering
updated 4.3 years ago by • 0 • written 4.9 years ago by ▴ 500
0
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0
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2.3k
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Comment: C: Gene expression file to Expression matrix
4.6 years ago by David_emir ▴ 500
0
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0
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2.3k
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Comment: C: Gene expression file to Expression matrix
4.6 years ago by David_emir ▴ 500
2
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7
replies
2.3k
views
Gene expression file to Expression matrix
RNA-Seq
updated 4.6 years ago by ▴ 200 • written 4.6 years ago by ▴ 500
0
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1
reply
2.3k
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Comment: C: Gene expression file to Expression matrix
4.6 years ago by David_emir ▴ 500
2
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5
replies
2.6k
views
rna seq public databases
RNA-Seq databases
4.6 years ago by David_emir ▴ 500
0
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1
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1.8k
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Comment: C: Quantification of cell cluster in Single cell data
4.7 years ago by David_emir ▴ 500
2
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3
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1.8k
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Quantification of cell cluster in Single cell data
RNA-Seq single cell seurat Wilcoxon
4.7 years ago by David_emir ▴ 500
0
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0
replies
1.4k
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Differentials Expressed Genes from each state in Monocle 2
single cell monocle2 DGE State
4.7 years ago by David_emir ▴ 500
1
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1
reply
1.5k
views
CMS subtype identification in Single cell data
single cell cmscaller RNA-Seq
updated 4.8 years ago by ★ 19k • written 4.8 years ago by ▴ 500
0
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1
reply
2.7k
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Comment: C: Statistical test on Single-cell clusters(cell types)
4.8 years ago by David_emir ▴ 500
0
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1
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2.7k
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Comment: C: Statistical test on Single-cell clusters(cell types)
4.8 years ago by David_emir ▴ 500
2
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7
replies
2.7k
views
Statistical test on Single-cell clusters(cell types)
statistical single cell exact permutation test
updated 3.2 years ago by 89k • written 4.8 years ago by ▴ 500
0
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0
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32k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
4.9 years ago by David_emir ▴ 500
18
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11
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32k
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Plotting heatmap of Marker genes in each celltypes in Seurat
seurat singlecell heatmap celltypes
updated 4.9 years ago by ★ 19k • written 4.9 years ago by ▴ 500
0
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1
reply
32k
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Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
4.9 years ago by David_emir ▴ 500
1
vote
1
reply
32k
views
Comment: C: Plotting heatmap of Marker genes in each celltypes in Seurat
4.9 years ago by David_emir ▴ 500
4
votes
3
replies
9.0k
views
Seurat :Violin plot showing relative expression of select differentially expressed genes
RNA-Seq seurat Violin plot
updated 4.9 years ago by ★ 5.2k • written 4.9 years ago by ▴ 500
0
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0
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9.0k
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Comment: C: Seurat :Violin plot showing relative expression of select differentially express
4.9 years ago by David_emir ▴ 500
0
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0
replies
14k
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Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
4.9 years ago by David_emir ▴ 500
0
votes
1
reply
14k
views
Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
4.9 years ago by David_emir ▴ 500
0
votes
1
reply
14k
views
Comment: C: Seurat Clustering - Cluster Numbers from 1 instead of 0
4.9 years ago by David_emir ▴ 500
1
vote
1
reply
5.3k
views
GSVA analysis between Clusters
GSVA Single cell seurat
updated 5.0 years ago by ▴ 230 • written 5.0 years ago by ▴ 500
5
votes
4
replies
21k
views
Exporting Raw counts into .csv file from seurat object
seurat raw counts csv
updated 3.4 years ago by • 0 • written 5.1 years ago by ▴ 500
0
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1
reply
25k
views
Comment: C: Subsetting - Raw Counts from Seurat Object
5.1 years ago by David_emir ▴ 500
3
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3
replies
25k
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Subsetting - Raw Counts from Seurat Object
seurat raw counts RNA-Seq
5.1 years ago by David_emir ▴ 500
0
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1
reply
2.7k
views
Comment: C: Count Matrix from Single cell RNA
5.3 years ago by David_emir ▴ 500
1
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3
replies
2.7k
views
Count Matrix from Single cell RNA
single cell RNA count matrix analysis
5.3 years ago by David_emir ▴ 500
0
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0
replies
4.4k
views
Comment: C: Can't open file 'features': [Errno 2] No such file or directory
5.3 years ago by David_emir ▴ 500
0
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1
reply
4.4k
views
Comment: C: Can't open file 'features': [Errno 2] No such file or directory
5.3 years ago by David_emir ▴ 500
4
votes
4
replies
4.4k
views
Can't open file 'features': [Errno 2] No such file or directory
2020plus 20/20Plus mafs random forest
updated 5.3 years ago by ▴ 1000 • written 5.3 years ago by ▴ 500
0
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0
replies
1.6k
views
Comment: C: Cancer driver mutations Identification from VCFs
5.3 years ago by David_emir ▴ 500
2
votes
2
replies
1.6k
views
Cancer driver mutations Identification from VCFs
cancer driver mutation vcf mcf
updated 5.3 years ago by ▴ 1000 • written 5.3 years ago by ▴ 500
3
votes
2
replies
6.4k
views
Changing Sample Names in Merged VCF file
VCF Sample
updated 5.3 years ago by 16k • written 5.3 years ago by ▴ 500
5
votes
5
replies
3.5k
views
Error RNA-seq data, TOPHAT
RNA-Seq
updated 3.3 years ago by 45k • written 10.6 years ago by ▴ 500
5
votes
5
replies
1.8k
views
Single cell Expression Analysis
Single cell RNA seq
updated 5.4 years ago by ★ 19k • written 5.4 years ago by ▴ 500
0
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0
replies
1.8k
views
Comment: C: Single cell Expression Analysis
5.4 years ago by David_emir ▴ 500
0
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4
replies
18k
views
Answer: A: Machine Learning For Cancer Classification - Part 3 - Predicting With A Random F
updated 5.6 years ago by 45k • written 9.2 years ago by ▴ 500
6
votes
3
replies
4.0k
views
Validating Results from NMF Clustering & Consensus clustering
RNA-Seq validation
updated 6.0 years ago by ▴ 20 • written 6.0 years ago by ▴ 500
0
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0
replies
2.2k
views
Comment: C: What is the best pipeline for analyzing Non-invasive prenatal (NIPT) data?
6.1 years ago by David_emir ▴ 500
1
vote
1
reply
5.5k
views
Comment: C: Aligning Multiple paired end files together
6.1 years ago by David_emir ▴ 500
191 results • Page 1 of 4
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