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Quality check pipeline for PCR cDNA ONT sequencing output.
ONT-PCR-cDNA Long-Reads RNA-seq Transcriptome
updated 10 weeks ago by 44k • written 11 weeks ago by ▴ 10
0
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1
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1.1k
views
GOATOOLS to perform Gene ontology enrichment analyses in Python in a non model organism.
Python RNA-seq Trascriptomics Gene-Ontology
updated 17 months ago by 44k • written 17 months ago by ▴ 10
0
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1
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770
views
Comment: Comment: Bowtie1 error while using HPC
2.6 years ago by Sbrillo ▴ 10
1
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3
replies
770
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Bowtie1 error while using HPC
alignment bowtie1 fastq HPC Bowtie
updated 2.6 years ago by 44k • written 2.6 years ago by ▴ 10
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0
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653
views
Comment: Comment: Bowtie1 error outputting data
2.6 years ago by Sbrillo ▴ 10
1
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2
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653
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Bowtie1 error outputting data
alignment bowtie1 bowtie fastq
2.6 years ago by Sbrillo ▴ 10
0
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0
replies
312
views
Finding motifs in Invertebrate UTRs
RNA UTRs trascription Regulatory Element
2.7 years ago by Sbrillo ▴ 10
0
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0
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494
views
Pacbio Iso seq sequencing depth
RNAseq Depth Isoformsequencing Pacbio Illumina
2.9 years ago by Sbrillo ▴ 10
0
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0
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888
views
Comment: Comment: Plot Blastn.table file on R
3.1 years ago by Sbrillo ▴ 10
1
vote
2
replies
888
views
Plot Blastn.table file on R
blastn gRNA Plotting R
3.1 years ago by Sbrillo ▴ 10
2
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3
replies
888
views
Blastn for gRNA characterization in ANopheles
Anopheles NCBI gRNA blastn
updated 3.4 years ago by 147k • written 3.4 years ago by ▴ 10
0
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1
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888
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Comment: Comment: Blastn for gRNA characterization in ANopheles
3.4 years ago by Sbrillo ▴ 10
0
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1
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1.6k
views
Comment: Comment: Short sequence alignment using Minimap2
3.6 years ago by Sbrillo ▴ 10
2
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3
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1.6k
views
Short sequence alignment using Minimap2
assembly minimap2 kmer gRNA pacbio
updated 3.6 years ago by 147k • written 3.7 years ago by ▴ 10
2
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2
replies
1.6k
views
Merging PacBio and Nanopore reads
Nanopore Pacbio next-gen long reads Assembly
updated 3.8 years ago by ▴ 130 • written 3.8 years ago by ▴ 10
5
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2
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5.1k
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From .csv file to fasta
fasta python genome Assembly kmer
3.8 years ago by Sbrillo ▴ 10
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1
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1.4k
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Comment: C: Merging bowtie output
3.9 years ago by Sbrillo ▴ 10
2
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4
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1.4k
views
Merging bowtie output
alignment bowtie bowtie2 Assembly fastq
3.9 years ago by Sbrillo ▴ 10
3
votes
2
replies
1.5k
views
ENA and SRA fastq files
fastq ENA sratoolkit next-gen Assembly
updated 3.9 years ago by ★ 1.5k • written 3.9 years ago by ▴ 10
0
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0
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554
views
Download and merge multiple PacBio reads from the same experiment
next-gen SRAtoolkit SRA archive PacBio reads
3.9 years ago by Sbrillo ▴ 10
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0
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1.7k
views
Comment: C: FastQC on HPC system doesn't work
3.9 years ago by Sbrillo ▴ 10
5
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2
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1.7k
views
FastQC on HPC system doesn't work
sequencing software error next-gen assembly
updated 3.9 years ago by 164k • written 3.9 years ago by ▴ 10
0
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0
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1.8k
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Comment: C: Merging xxx.F and xxx.R illumina reads
3.9 years ago by Sbrillo ▴ 10
0
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1
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1.8k
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Comment: C: Merging xxx.F and xxx.R illumina reads
3.9 years ago by Sbrillo ▴ 10
0
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0
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1.8k
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Comment: C: Merging xxx.F and xxx.R illumina reads
3.9 years ago by Sbrillo ▴ 10
0
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1
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1.8k
views
Comment: A: Merging xxx.F and xxx.R illumina reads
3.9 years ago by Sbrillo ▴ 10
4
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7
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1.8k
views
Merging xxx.F and xxx.R illumina reads
alignment Assembly sequence next-gen
3.9 years ago by Sbrillo ▴ 10
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