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109
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Comment: Comment: Depth in Cram file does not match depth in VCF file
4 hours ago by karl.stamm 4.1k
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1
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435
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Comment: Comment: Is there too little variation to detect meaningful gene changes?
14 days ago by karl.stamm 4.1k
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0
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694
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Comment: Comment: Genotype imputation without a reference panel
6 months ago by karl.stamm 4.1k
2
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1
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2.2k
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Answer: Answer: Understanding 1/1 output in VCF
2.3 years ago by karl.stamm 4.1k
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0
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1.4k
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Comment: Comment: What are the values shown on DESEQ2 heatmap legend?
2.6 years ago by karl.stamm 4.1k
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1
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3.0k
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Comment: Comment: AF = 0.5 in chrX, VCF of a male
2.6 years ago by karl.stamm 4.1k
1
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0
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1.1k
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Answer: Answer: What are the data values in qRT-PCR for statistical testing? dCT? or 2^-dCT?
2.8 years ago by karl.stamm 4.1k
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0
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917
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Comment: Comment: Why am I getting same linear regression lines for 'x' on 'y' and 'y' on 'x'?
2.9 years ago by karl.stamm 4.1k
1
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1
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1.1k
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Comment: Comment: PCA does not show distinction in groups
3.1 years ago by karl.stamm 4.1k
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0
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2.8k
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Comment: Comment: Non biology & computer professional interested in bioinformatics
3.5 years ago by karl.stamm 4.1k
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1
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2.8k
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Answer: Answer: Non biology & computer professional interested in bioinformatics
3.5 years ago by karl.stamm 4.1k
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0
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1.1k
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Answer: Answer: RSQLite slowness
3.5 years ago by karl.stamm 4.1k
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1
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1.2k
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Comment: Comment: probability of two samples sharing a SNP by error
3.5 years ago by karl.stamm 4.1k
1
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0
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6.9k
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Answer: Answer: Why does my t-test fail?
updated 3.6 years ago by 45k • written 3.6 years ago by 4.1k
0
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1
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2.7k
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Comment: Comment: SNP Pruning Through PCA
3.6 years ago by karl.stamm 4.1k
1
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0
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958
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Comment: Comment: Advise for a computational neophyte
3.6 years ago by karl.stamm 4.1k
4
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1
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1.6k
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Answer: Answer: RNA-seq for samples with RIN<3
3.7 years ago by karl.stamm 4.1k
3
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0
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1.3k
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Answer: Answer: How to select columns from a dataframe of which the name ends with a specific wo
3.8 years ago by karl.stamm 4.1k
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0
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1.1k
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Comment: C: On understanding the axis of a PCA plot
4.1 years ago by karl.stamm 4.1k
0
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1
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1.8k
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Comment: C: [RNA-seq] Extremely Unconsistent Raw Count from Different Tools; a dark mistery
4.1 years ago by karl.stamm 4.1k
0
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0
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3.3k
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Comment: C: A question on the interpretation of a PCA plot
4.1 years ago by karl.stamm 4.1k
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1
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1.3k
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Comment: C: Very high ratio of cases to controls - how to increase statistical power?
4.1 years ago by karl.stamm 4.1k
0
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1
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1.3k
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Comment: C: Very high ratio of cases to controls - how to increase statistical power?
4.1 years ago by karl.stamm 4.1k
0
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1
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1.2k
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Comment: C: Problems with the same gene names in R, any help?
4.1 years ago by karl.stamm 4.1k
0
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0
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5.5k
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Comment: C: PEPATAC error: ConnectionResetError: [Errno 104] Connection reset by peer
4.2 years ago by karl.stamm 4.1k
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0
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9.0k
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Comment: C: How to handle duplicate row names in R
4.2 years ago by karl.stamm 4.1k
0
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0
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1.1k
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Answer: A: How to map reads onto human hg38 gene body regions instead of whole genome?
4.2 years ago by karl.stamm 4.1k
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1
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1.2k
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Answer: A: Loading Matrices of 10X Genomics failed
4.2 years ago by karl.stamm 4.1k
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0
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2.2k
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Comment: C: During RNA-seq analysis a lot of pseudogenes come up as DE
4.2 years ago by karl.stamm 4.1k
1
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0
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4.6k
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Comment: C: What are the 5 biggest challenges/ opportunities in Bioinformatics going into 20
4.2 years ago by karl.stamm 4.1k
0
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0
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3.1k
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Comment: C: Is there a tool to predict if a missense variant causes a loss of function on th
4.3 years ago by karl.stamm 4.1k
0
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1
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3.3k
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Comment: C: A question on the interpretation of a PCA plot
4.3 years ago by karl.stamm 4.1k
0
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0
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1.3k
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Comment: C: Optimal Number of SNPs in NA12878 WES Data
4.3 years ago by karl.stamm 4.1k
0
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1
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1.3k
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Comment: C: Optimal Number of SNPs in NA12878 WES Data
4.3 years ago by karl.stamm 4.1k
0
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1
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806
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Comment: C: Mapping transcriptomes against each other to find genetic differences
4.3 years ago by karl.stamm 4.1k
1
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1
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2.7k
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Answer: A: Read depth maxing out at about 8000
4.3 years ago by karl.stamm 4.1k
0
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0
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1.7k
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Comment: C: Convert R script to python(implementation of the UPGMA OR neighbor joining algor
4.3 years ago by karl.stamm 4.1k
0
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0
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1.6k
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Comment: C: Transforming big file
4.3 years ago by karl.stamm 4.1k
0
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1
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1.6k
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Comment: C: Transforming big file
4.3 years ago by karl.stamm 4.1k
1
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0
replies
1.8k
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Answer: A: Is there a way to map long fasta reads to short reference sequences?
4.4 years ago by karl.stamm 4.1k
1
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0
replies
1.1k
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Comment: C: Wes analysis - Quality control on sequenced data
4.4 years ago by karl.stamm 4.1k
0
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1
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941
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Comment: C: What is the smallest number of cases you can have in a GWAS before interpretatio
4.4 years ago by karl.stamm 4.1k
0
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1
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5.9k
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Comment: C: how do I find the genes which are common to and those which differ between multi
4.4 years ago by karl.stamm 4.1k
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0
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4.6k
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Comment: C: Why is gnomAD AF vs gnomAD exome AF so different?
4.4 years ago by karl.stamm 4.1k
0
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0
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1.4k
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Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
4.4 years ago by karl.stamm 4.1k
0
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1
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2.3k
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Comment: C: Interpreting theta value
4.4 years ago by karl.stamm 4.1k
0
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1
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1.4k
views
Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
4.4 years ago by karl.stamm 4.1k
1
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1
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1.6k
views
Answer: A: Multiple plots using for loops in R
4.4 years ago by karl.stamm 4.1k
0
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0
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1.6k
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Comment: C: Publicly Available RNA-Seq Datasets from Human Heart
4.4 years ago by karl.stamm 4.1k
0
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0
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1.3k
views
Comment: C: Should we Ignore heterozygous SNPs while constructing SNP based phylogeny
4.5 years ago by karl.stamm 4.1k
511 results • Page 1 of 11
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