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1.4k
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miRNAseq - over-presented sequence in negative control
miRNAseq adaptor dimer
updated 8 months ago by ▴ 40 • written 21 months ago by ▴ 20
1
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1
reply
1.4k
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Comment: Comment: Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
12 months ago by MH85 ▴ 20
6
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5
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1.4k
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Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
smallRNAseq UMI NEXTflex UMI_tools miRNA
updated 12 months ago by 21k • written 12 months ago by ▴ 20
1
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0
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547
views
Using Bowtie for hsa-miRNA Reads: Should I Restrict Reverse-Complement Mapping?
hsa-miR miRNA Bowtie mapping
17 months ago by MH85 ▴ 20
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0
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1.4k
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Comment: Comment: miRNAseq - over-presented sequence in negative control
21 months ago by MH85 ▴ 20
0
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1
reply
759
views
Bowtie - multiple alignments and seed length vs read length in miRNA mapping
miRNA hsa-miR Bowtie
updated 23 months ago by 45k • written 23 months ago by ▴ 20
0
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0
replies
442
views
AD sum about half of DP in vcf file
vcf SNP read-depth Allelic-depth
updated 23 months ago by 45k • written 23 months ago by ▴ 20
0
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0
replies
442
views
PheWAS - risk/effect allele
GWAS PheWAS Open_Targets_Genetics
2.1 years ago by MH85 ▴ 20
0
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0
replies
522
views
Minimal insert size for Illumina MiniSeq
insert-size MiniSeq amplicon Illumina
updated 3.0 years ago by 45k • written 3.0 years ago by ▴ 20
1
vote
1
reply
642
views
Libraries with different size in the same MiniSeq cartridge
Illumina MiniSeq UMI
updated 2.2 years ago by 45k • written 3.2 years ago by ▴ 20
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0
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585
views
fgbio read structure
fgbio UMI ExtractUmisFromBam
3.5 years ago by MH85 ▴ 20
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0
replies
604
views
Simulate offspring's genotype from parental genotypes (SNPs)
SNPs Simulation Pedigree Parentage
3.7 years ago by MH85 ▴ 20
0
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0
replies
861
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Comment: Comment: Sample reads across mapping
4.0 years ago by MH85 ▴ 20
2
votes
2
replies
861
views
Sample reads across mapping
bam2fasta mapping extract_reads
4.0 years ago by MH85 ▴ 20
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0
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914
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Comment: Comment: Supernova 10X Genomics - estimation of gap length
4.0 years ago by MH85 ▴ 20
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1
reply
914
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Supernova 10X Genomics - estimation of gap length
gap_length_estimation 10X_Genomics genome_assembly Supernova_assembler
4.0 years ago by MH85 ▴ 20
0
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1
reply
2.2k
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Comment: Comment: genome assembly - size of gaps
4.0 years ago by MH85 ▴ 20
0
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1
reply
2.2k
views
Comment: Comment: genome assembly - size of gaps
4.0 years ago by MH85 ▴ 20
3
votes
6
replies
2.2k
views
genome assembly - size of gaps
PBJelly assembly_genome linked_reads gaps
updated 4.0 years ago by 15k • written 4.0 years ago by ▴ 20
0
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0
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943
views
Comment: C: Maker Annotation - multiple gene models give same blastp match
4.3 years ago by MH85 ▴ 20
2
votes
2
replies
943
views
Maker Annotation - multiple gene models give same blastp match
genome annotation Maker
updated 4.3 years ago by 15k • written 4.3 years ago by ▴ 20
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