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1.1k
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miRNAseq - over-presented sequence in negative control
miRNAseq adaptor dimer
updated 7 weeks ago by ▴ 30 • written 14 months ago by ▴ 20
1
vote
1
reply
673
views
Comment: Comment: Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
5 months ago by MH85 ▴ 20
6
votes
5
replies
673
views
Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
smallRNAseq UMI NEXTflex UMI_tools miRNA
updated 5 months ago by 20k • written 5 months ago by ▴ 20
1
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0
replies
394
views
Using Bowtie for hsa-miRNA Reads: Should I Restrict Reverse-Complement Mapping?
hsa-miR miRNA Bowtie mapping
10 months ago by MH85 ▴ 20
0
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0
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1.1k
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Comment: Comment: miRNAseq - over-presented sequence in negative control
14 months ago by MH85 ▴ 20
0
votes
1
reply
580
views
Bowtie - multiple alignments and seed length vs read length in miRNA mapping
miRNA hsa-miR Bowtie
updated 16 months ago by 44k • written 16 months ago by ▴ 20
0
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0
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367
views
AD sum about half of DP in vcf file
vcf SNP read-depth Allelic-depth
updated 17 months ago by 44k • written 17 months ago by ▴ 20
0
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0
replies
379
views
PheWAS - risk/effect allele
GWAS PheWAS Open_Targets_Genetics
18 months ago by MH85 ▴ 20
0
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0
replies
431
views
Minimal insert size for Illumina MiniSeq
insert-size MiniSeq amplicon Illumina
updated 2.5 years ago by 44k • written 2.5 years ago by ▴ 20
1
vote
1
reply
521
views
Libraries with different size in the same MiniSeq cartridge
Illumina MiniSeq UMI
updated 20 months ago by 44k • written 2.6 years ago by ▴ 20
0
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0
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467
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fgbio read structure
fgbio UMI ExtractUmisFromBam
2.9 years ago by MH85 ▴ 20
0
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0
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514
views
Simulate offspring's genotype from parental genotypes (SNPs)
SNPs Simulation Pedigree Parentage
3.1 years ago by MH85 ▴ 20
0
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0
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719
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Comment: Comment: Sample reads across mapping
3.4 years ago by MH85 ▴ 20
2
votes
2
replies
719
views
Sample reads across mapping
bam2fasta mapping extract_reads
3.4 years ago by MH85 ▴ 20
0
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0
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789
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Comment: Comment: Supernova 10X Genomics - estimation of gap length
3.4 years ago by MH85 ▴ 20
0
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1
reply
789
views
Supernova 10X Genomics - estimation of gap length
gap_length_estimation 10X_Genomics genome_assembly Supernova_assembler
3.4 years ago by MH85 ▴ 20
0
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1
reply
1.9k
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Comment: Comment: genome assembly - size of gaps
3.5 years ago by MH85 ▴ 20
0
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1
reply
1.9k
views
Comment: Comment: genome assembly - size of gaps
3.5 years ago by MH85 ▴ 20
3
votes
6
replies
1.9k
views
genome assembly - size of gaps
PBJelly assembly_genome linked_reads gaps
updated 3.5 years ago by 15k • written 3.5 years ago by ▴ 20
0
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0
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746
views
Comment: C: Maker Annotation - multiple gene models give same blastp match
3.8 years ago by MH85 ▴ 20
2
votes
2
replies
746
views
Maker Annotation - multiple gene models give same blastp match
genome annotation Maker
updated 3.8 years ago by 15k • written 3.8 years ago by ▴ 20
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