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Comment: Comment: Differential expression genes(downstream analysis)
3 months ago by pinheirofabiano ▴ 100
1
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0
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372
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Comment: Comment: HISAT2 human index and GTF file version incompatibility
3 months ago by pinheirofabiano ▴ 100
1
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5
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927
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gene ID to gene symbol in R
R
updated 3 months ago by ★ 7.8k • written 4 months ago by ▴ 100
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0
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927
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Comment: Comment: gene ID to gene symbol in R
4 months ago by pinheirofabiano ▴ 100
0
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1
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927
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Comment: Comment: gene ID to gene symbol in R
4 months ago by pinheirofabiano ▴ 100
0
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2
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527
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Trimmomatic 0.39 fails for adapters
Trimmomatic
updated 4 months ago by 102k • written 4 months ago by ▴ 100
1
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1
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840
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Comment: Comment: FastQC and HISAT2
4 months ago by pinheirofabiano ▴ 100
3
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1
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467
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identify sex in a FASTA RNA-Seq file
RNA-Seq
updated 5 months ago by ▴ 140 • written 5 months ago by ▴ 100
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1
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804
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Comment: Comment: Batch correction in RNAseq
6 months ago by pinheirofabiano ▴ 100
5
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11
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1.6k
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7 follow
why R scripts are preferred to biopython for RNA-Seq analyses?
R Python
updated 6 months ago by 15k • written 6 months ago by ▴ 100
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1
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439
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Answer: Answer: Is there a database for housekeeping genes?
6 months ago by pinheirofabiano ▴ 100
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1
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1.6k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
6 months ago by pinheirofabiano ▴ 100
0
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1
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1.6k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
6 months ago by pinheirofabiano ▴ 100
0
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1
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639
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Comment: Comment: RNA seq data for normal samples
6 months ago by pinheirofabiano ▴ 100
0
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0
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639
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Comment: Comment: RNA seq data for normal samples
6 months ago by pinheirofabiano ▴ 100
1
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1
reply
434
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Comment: Comment: GSEA, RNA-Seq
6 months ago by pinheirofabiano ▴ 100
0
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0
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549
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Answer: Answer: NCBI-SRA file downloading error
6 months ago by pinheirofabiano ▴ 100
1
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0
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773
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Answer: Answer: Download data from data dryad using CLI?
6 months ago by pinheirofabiano ▴ 100
2
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1
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798
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Answer: Answer: Increase the memory and core usage of R
6 months ago by pinheirofabiano ▴ 100
1
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1
reply
696
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Answer: Answer: MetaTranscriptomics amount of viable reads
6 months ago by pinheirofabiano ▴ 100
0
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0
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499
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Comment: Comment: RNA seq data analysis
7 months ago by pinheirofabiano ▴ 100
0
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0
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445
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Comment: Comment: Can I analyze single-end and paired-end RNA-Seq data together?
7 months ago by pinheirofabiano ▴ 100
2
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14
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1.3k
views
convert list to fasta format
python
updated 7 months ago by 44k • written 7 months ago by ▴ 100
1
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1
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1.3k
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Answer: Answer: convert list to fasta format
updated 7 months ago by 44k • written 7 months ago by ▴ 100
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0
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1.3k
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Comment: Comment: convert list to fasta format
updated 7 months ago by 44k • written 7 months ago by ▴ 100
0
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1
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1.3k
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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1
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1.3k
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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1
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1.3k
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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1
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1.3k
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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1
reply
1.3k
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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0
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1.4k
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Comment: Comment: Conversion of Gene Name to Ensembl ID
7 months ago by pinheirofabiano ▴ 100
0
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2
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1.4k
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Answer: Answer: Conversion of Gene Name to Ensembl ID
updated 7 months ago by 44k • written 7 months ago by ▴ 100
0
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0
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637
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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1
reply
637
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Comment: Comment: convert list to fasta format
7 months ago by pinheirofabiano ▴ 100
0
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4
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637
views
convert list to fasta format
python fasta
7 months ago by pinheirofabiano ▴ 100
1
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0
replies
1.5k
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Answer: Answer: Heatmap and rna-seq
9 months ago by pinheirofabiano ▴ 100
0
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0
replies
1.0k
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Comment: Comment: kraken2 vs krakenuniq
10 months ago by pinheirofabiano ▴ 100
3
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2
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1.0k
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kraken2 vs krakenuniq
KrakenUniq kraken2
10 months ago by pinheirofabiano ▴ 100
0
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1
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902
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Comment: Comment: TCGA-BRCA tissue and RNAseq problem
23 months ago by pinheirofabiano ▴ 100
0
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1
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2.2k
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Comment: Comment: split fasta file to train deep learning model
23 months ago by pinheirofabiano ▴ 100
0
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1
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2.2k
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Comment: Comment: split fasta file to train deep learning model
23 months ago by pinheirofabiano ▴ 100
0
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0
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2.2k
views
Comment: Comment: split fasta file to train deep learning model
23 months ago by pinheirofabiano ▴ 100
11
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8
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2.2k
views
6 follow
split fasta file to train deep learning model
fasta split bash R
updated 23 months ago by 8.7k • written 23 months ago by ▴ 100
2
votes
3
replies
1.6k
views
download fasta file from uniprot
protein sequences uniprot
updated 2.1 years ago by 149k • written 2.1 years ago by ▴ 100
0
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0
replies
1.2k
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Comment: Comment: Network Analysis - how to generate the edges and vertices dataset?
3.0 years ago by pinheirofabiano ▴ 100
0
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0
replies
2.1k
views
Comment: Comment: how to build an interaction network in R
3.0 years ago by pinheirofabiano ▴ 100
2
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4
replies
1.2k
views
Network Analysis - how to generate the edges and vertices dataset?
igraph network R analysis
updated 3.0 years ago by 11k • written 3.0 years ago by ▴ 100
0
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1
reply
1.8k
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Comment: Comment: TCGA dataset normalization
3.4 years ago by pinheirofabiano ▴ 100
1
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3
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2.1k
views
how to build an interaction network in R
r networks
3.0 years ago by pinheirofabiano ▴ 100
0
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0
replies
1.3k
views
Comment: Comment: guilt by association
3.6 years ago by pinheirofabiano ▴ 100
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