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230
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Comment: Comment: Differential expression genes(downstream analysis)
22 days ago by pinheirofabiano ▴ 100
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264
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Comment: Comment: HISAT2 human index and GTF file version incompatibility
26 days ago by pinheirofabiano ▴ 100
1
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5
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534
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gene ID to gene symbol in R
R
updated 29 days ago by ★ 7.6k • written 4 weeks ago by ▴ 100
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0
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534
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Comment: Comment: gene ID to gene symbol in R
4 weeks ago by pinheirofabiano ▴ 100
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1
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534
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Comment: Comment: gene ID to gene symbol in R
4 weeks ago by pinheirofabiano ▴ 100
0
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2
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417
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Trimmomatic 0.39 fails for adapters
Trimmomatic
updated 7 weeks ago by 101k • written 7 weeks ago by ▴ 100
1
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1
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673
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Comment: Comment: FastQC and HISAT2
8 weeks ago by pinheirofabiano ▴ 100
3
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1
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362
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identify sex in a FASTA RNA-Seq file
RNA-Seq
updated 10 weeks ago by ▴ 140 • written 10 weeks ago by ▴ 100
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1
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592
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Comment: Comment: Batch correction in RNAseq
3 months ago by pinheirofabiano ▴ 100
5
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11
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1.1k
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7 follow
why R scripts are preferred to biopython for RNA-Seq analyses?
R Python
updated 3 months ago by 15k • written 3 months ago by ▴ 100
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1
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305
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Answer: Answer: Is there a database for housekeeping genes?
3 months ago by pinheirofabiano ▴ 100
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1
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1.1k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
3 months ago by pinheirofabiano ▴ 100
0
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1
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1.1k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
3 months ago by pinheirofabiano ▴ 100
0
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1
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483
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Comment: Comment: RNA seq data for normal samples
3 months ago by pinheirofabiano ▴ 100
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0
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483
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Comment: Comment: RNA seq data for normal samples
3 months ago by pinheirofabiano ▴ 100
1
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1
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307
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Comment: Comment: GSEA, RNA-Seq
3 months ago by pinheirofabiano ▴ 100
0
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0
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356
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Answer: Answer: NCBI-SRA file downloading error
3 months ago by pinheirofabiano ▴ 100
1
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0
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478
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Answer: Answer: Download data from data dryad using CLI?
3 months ago by pinheirofabiano ▴ 100
2
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1
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573
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Answer: Answer: Increase the memory and core usage of R
3 months ago by pinheirofabiano ▴ 100
1
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1
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482
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Answer: Answer: MetaTranscriptomics amount of viable reads
3 months ago by pinheirofabiano ▴ 100
0
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0
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369
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Comment: Comment: RNA seq data analysis
4 months ago by pinheirofabiano ▴ 100
0
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0
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342
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Comment: Comment: Can I analyze single-end and paired-end RNA-Seq data together?
4 months ago by pinheirofabiano ▴ 100
2
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14
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845
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convert list to fasta format
python
updated 4 months ago by 44k • written 4 months ago by ▴ 100
1
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1
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845
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Answer: Answer: convert list to fasta format
updated 4 months ago by 44k • written 4 months ago by ▴ 100
0
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0
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845
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Comment: Comment: convert list to fasta format
updated 4 months ago by 44k • written 4 months ago by ▴ 100
0
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1
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845
views
Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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1
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845
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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1
reply
845
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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1
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845
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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1
reply
845
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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0
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953
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Comment: Comment: Conversion of Gene Name to Ensembl ID
4 months ago by pinheirofabiano ▴ 100
0
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2
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953
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Answer: Answer: Conversion of Gene Name to Ensembl ID
updated 4 months ago by 44k • written 4 months ago by ▴ 100
0
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0
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442
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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1
reply
442
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Comment: Comment: convert list to fasta format
4 months ago by pinheirofabiano ▴ 100
0
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4
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442
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convert list to fasta format
python fasta
4 months ago by pinheirofabiano ▴ 100
1
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0
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1.2k
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Answer: Answer: Heatmap and rna-seq
6 months ago by pinheirofabiano ▴ 100
0
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0
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790
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Comment: Comment: kraken2 vs krakenuniq
7 months ago by pinheirofabiano ▴ 100
3
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2
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790
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kraken2 vs krakenuniq
KrakenUniq kraken2
7 months ago by pinheirofabiano ▴ 100
0
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1
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806
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Comment: Comment: TCGA-BRCA tissue and RNAseq problem
20 months ago by pinheirofabiano ▴ 100
0
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1
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1.9k
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Comment: Comment: split fasta file to train deep learning model
20 months ago by pinheirofabiano ▴ 100
0
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1
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1.9k
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Comment: Comment: split fasta file to train deep learning model
20 months ago by pinheirofabiano ▴ 100
0
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0
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1.9k
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Comment: Comment: split fasta file to train deep learning model
20 months ago by pinheirofabiano ▴ 100
11
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8
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1.9k
views
6 follow
split fasta file to train deep learning model
fasta split bash R
updated 20 months ago by 8.7k • written 20 months ago by ▴ 100
2
votes
3
replies
1.4k
views
download fasta file from uniprot
protein sequences uniprot
updated 22 months ago by 147k • written 22 months ago by ▴ 100
0
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0
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1.1k
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Comment: Comment: Network Analysis - how to generate the edges and vertices dataset?
2.8 years ago by pinheirofabiano ▴ 100
0
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0
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1.9k
views
Comment: Comment: how to build an interaction network in R
2.8 years ago by pinheirofabiano ▴ 100
2
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4
replies
1.1k
views
Network Analysis - how to generate the edges and vertices dataset?
igraph network R analysis
updated 2.8 years ago by 11k • written 2.8 years ago by ▴ 100
0
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1
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1.7k
views
Comment: Comment: TCGA dataset normalization
3.2 years ago by pinheirofabiano ▴ 100
1
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3
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1.9k
views
how to build an interaction network in R
r networks
2.8 years ago by pinheirofabiano ▴ 100
0
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0
replies
1.2k
views
Comment: Comment: guilt by association
3.3 years ago by pinheirofabiano ▴ 100
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